RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TMEM43Q9BTV4 400 aa19.9■□□□□ 0.78
PTCD3-203ENST00000409783 ZNF426Q9BUY5 554 aa19.9■□□□□ 0.78
PTCD3-203ENST00000409783 C1orf21Q9H246 121 aa19.9■□□□□ 0.78
PTCD3-203ENST00000409783 DCAF13Q9NV06 445 aaKnown RBP19.9■□□□□ 0.78
PTCD3-203ENST00000409783 SELENONQ9NZV5 590 aa19.9■□□□□ 0.78
PTCD3-203ENST00000409783 SNX13Q9Y5W8 968 aa19.9■□□□□ 0.78
PTCD3-203ENST00000409783 ZNF724A8MTY0 619 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 SMNDC1O75940 238 aaKnown RBP eCLIP19.89■□□□□ 0.77
PTCD3-203ENST00000409783 AHSA1O95433 338 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 RPS5P46782 204 aaKnown RBP19.89■□□□□ 0.77
PTCD3-203ENST00000409783 SLC16A1P53985 500 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 ZNF787Q6DD87 383 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 SETXQ7Z333 2677 aaKnown RBP19.89■□□□□ 0.77
PTCD3-203ENST00000409783 GDF7Q7Z4P5 450 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 TSEN54Q7Z6J9 526 aaKnown RBP19.89■□□□□ 0.77
PTCD3-203ENST00000409783 TMEM99Q8N816 258 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 ZNF610Q8N9Z0 462 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 PIGXQ8TBF5 258 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 SLC41A3Q96GZ6 507 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 AMBRA1Q9C0C7 1298 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 POLR2J2Q9GZM3 115 aaKnown RBP19.89■□□□□ 0.77
PTCD3-203ENST00000409783 POLR2J3Q9H1A7 115 aaKnown RBP19.89■□□□□ 0.77
PTCD3-203ENST00000409783 MAGEL2Q9UJ55 1249 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 SLC7A7Q9UM01 511 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 PROCRQ9UNN8 238 aa19.89■□□□□ 0.77
PTCD3-203ENST00000409783 TRAV36DV7A0A075B6V5 113 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 AQP7P3A6NL99 342 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 ARPC2O15144 300 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 AKR7A3O95154 331 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 OR5F1O95221 314 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 PTNP21246 168 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 LTBQ06643 244 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 PIN1Q13526 163 aaPredicted RBP19.88■□□□□ 0.77
PTCD3-203ENST00000409783 IFI44LQ53G44 452 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 TMEM201Q5SNT2 666 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 FAM69AQ5T7M9 428 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 DMRTC2Q8IXT2 367 aaPredicted RBP19.88■□□□□ 0.77
PTCD3-203ENST00000409783 ARHGAP24Q8N264 748 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 FAM86B1Q8N7N1 296 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 OR6S1Q8NH40 331 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 RNF217Q8TC41 542 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 GEMIN6Q8WXD5 167 aaKnown RBP19.88■□□□□ 0.77
PTCD3-203ENST00000409783 TACO1Q9BSH4 297 aaKnown RBP19.88■□□□□ 0.77
PTCD3-203ENST00000409783 NAA11Q9BSU3 229 aaPredicted RBP19.88■□□□□ 0.77
PTCD3-203ENST00000409783 RBM24Q9BX46 236 aaKnown RBP19.88■□□□□ 0.77
PTCD3-203ENST00000409783 TAPBPLQ9BX59 468 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 GALNT8Q9NY28 637 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 RIMS3Q9UJD0 308 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 FOXD3Q9UJU5 478 aaPredicted RBP19.88■□□□□ 0.77
PTCD3-203ENST00000409783 A4GNTQ9UNA3 340 aa19.88■□□□□ 0.77
PTCD3-203ENST00000409783 CRYBG3Q68DQ2 2970 aa19.87■□□□□ 0.77
PTCD3-203ENST00000409783 BGLAPP02818 100 aa19.87■□□□□ 0.77
PTCD3-203ENST00000409783 FUT4P22083 530 aa19.87■□□□□ 0.77
PTCD3-203ENST00000409783 EDNRAP25101 427 aa19.87■□□□□ 0.77
PTCD3-203ENST00000409783 UQCRC1P31930 480 aa19.87■□□□□ 0.77
PTCD3-203ENST00000409783 NTF4P34130 210 aa19.87■□□□□ 0.77
PTCD3-203ENST00000409783 SLC17A1Q14916 467 aa19.87■□□□□ 0.77
PTCD3-203ENST00000409783 OTUD3Q5T2D3 398 aaPredicted RBP19.87■□□□□ 0.77
PTCD3-203ENST00000409783 MEX3BQ6ZN04 569 aaKnown RBP19.87■□□□□ 0.77
PTCD3-203ENST00000409783 NKAIN4Q8IVV8 208 aa19.87■□□□□ 0.77
PTCD3-203ENST00000409783 ZNF775Q96BV0 537 aaPredicted RBP19.87■□□□□ 0.77
PTCD3-203ENST00000409783 SLC7A6OSQ96CW6 309 aaPredicted RBP19.87■□□□□ 0.77
PTCD3-203ENST00000409783 MPP4Q96JB8 637 aa19.87■□□□□ 0.77
PTCD3-203ENST00000409783 RPS6KA6Q9UK32 745 aa19.87■□□□□ 0.77
PTCD3-203ENST00000409783 OR2T1O43869 369 aa19.86■□□□□ 0.77
PTCD3-203ENST00000409783 PRSS23O95084 383 aa19.86■□□□□ 0.77
PTCD3-203ENST00000409783 PCYT1AP49585 367 aa19.86■□□□□ 0.77
PTCD3-203ENST00000409783 TFAP2EQ6VUC0 442 aa19.86■□□□□ 0.77
PTCD3-203ENST00000409783 SLC25A36Q96CQ1 311 aa19.86■□□□□ 0.77
PTCD3-203ENST00000409783 PRRC1Q96M27 445 aa19.86■□□□□ 0.77
PTCD3-203ENST00000409783 C12orf49Q9H741 205 aa19.86■□□□□ 0.77
PTCD3-203ENST00000409783 SEC14L4Q9UDX3 406 aa19.86■□□□□ 0.77
PTCD3-203ENST00000409783 PRPF19Q9UMS4 504 aaKnown RBP19.86■□□□□ 0.77
PTCD3-203ENST00000409783 UNC79Q9P2D8 2635 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 J3KTA2 159 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 FFAR1O14842 300 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 IFNW1P05000 195 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 THRBP10828 461 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 TAS2R41P59536 307 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 SNTB1Q13884 538 aaKnown RBP19.85■□□□□ 0.77
PTCD3-203ENST00000409783 FKBP9P1Q75LS8 142 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 LRRC46Q96FV0 321 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 C7orf34Q96L11 122 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 MOGAT1Q96PD6 335 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 EPYCQ99645 322 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 SF3B5Q9BWJ5 86 aaKnown RBP19.85■□□□□ 0.77
PTCD3-203ENST00000409783 SAMD4AQ9UPU9 718 aaKnown RBP19.85■□□□□ 0.77
PTCD3-203ENST00000409783 FLVCR1Q9Y5Y0 555 aa19.85■□□□□ 0.77
PTCD3-203ENST00000409783 CELSR2Q9HCU4 2923 aa19.84■□□□□ 0.77
PTCD3-203ENST00000409783 LRRN3E7EW58 273 aa19.84■□□□□ 0.77
PTCD3-203ENST00000409783 GMNNO75496 209 aa19.84■□□□□ 0.77
PTCD3-203ENST00000409783 SEMG1P04279 462 aa19.84■□□□□ 0.77
PTCD3-203ENST00000409783 COX6B1P14854 86 aa19.84■□□□□ 0.77
PTCD3-203ENST00000409783 GRPRP30550 384 aa19.84■□□□□ 0.77
PTCD3-203ENST00000409783 CD79BP40259 229 aa19.84■□□□□ 0.77
PTCD3-203ENST00000409783 YAP1P46937 504 aaKnown RBP19.84■□□□□ 0.77
PTCD3-203ENST00000409783 OR3A2P47893 321 aa19.84■□□□□ 0.77
PTCD3-203ENST00000409783 SORDQ00796 357 aa19.84■□□□□ 0.77
PTCD3-203ENST00000409783 FAM27E3Q08E93 113 aa19.84■□□□□ 0.77
PTCD3-203ENST00000409783 BNIP1Q12981 228 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms