RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 OR9K2Q8NGE7 335 aa17.28■□□□□ 0.36
TSPAN4-209ENST00000409543 C18orf12Q96KH6 178 aa17.28■□□□□ 0.36
TSPAN4-209ENST00000409543 MUS81Q96NY9 551 aa17.28■□□□□ 0.36
TSPAN4-209ENST00000409543 CPPED1Q9BRF8 314 aaPredicted RBP17.28■□□□□ 0.36
TSPAN4-209ENST00000409543 NDUFAF1Q9Y375 327 aa17.28■□□□□ 0.36
TSPAN4-209ENST00000409543 PDLIM1O00151 329 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 VAMP5O95183 116 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 SLC6A2P23975 617 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 PTH2RP49190 550 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 SCARB2Q14108 478 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 ADRM1Q16186 407 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 GABRA6Q16445 453 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 METTL21CQ5VZV1 264 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 TMEM225Q6GV28 225 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 OR7E24Q6IFN5 339 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 C6orf89Q6UWU4 347 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 DPP10Q8N608 796 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 ZIC4Q8N9L1 334 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 OR52E4Q8NGH9 312 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 MFSD8Q8NHS3 518 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 TSPEARQ8WU66 669 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 FBXW5Q969U6 566 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 CXorf56Q9H5V9 222 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 C12orf10Q9HB07 376 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 SLC7A10Q9NS82 523 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 ZNF701Q9NV72 531 aaPredicted RBP17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 ADPRHL2Q9NX46 363 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 UPB1Q9UBR1 384 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 RPS6KB2Q9UBS0 482 aa17.27■□□□□ 0.36
TSPAN4-209ENST00000409543 VPS13CQ709C8 3753 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 PRORSD1PA6NEY8 169 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 TPST1O60507 370 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 AHSA1O95433 338 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 ITGA5P08648 1049 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 P2RY4P51582 365 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 FOXG1P55316 489 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 ZNF672Q499Z4 452 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 TSPO2Q5TGU0 170 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 YTHDF3Q7Z739 585 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 BIVMQ86UB2 503 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 ZNF607Q96SK3 696 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 GSX1Q9H4S2 264 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 NPAP1Q9NZP6 1156 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 SLC25A15Q9Y619 301 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 CADP27708 2225 aa17.26■□□□□ 0.35
TSPAN4-209ENST00000409543 A0A0G2JND7 137 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 ELOA3DA6NLF2 546 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 FTCDNL1E5RQL4 147 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 ANGPT2O15123 496 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 SERPINB7O75635 380 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 EGR4Q05215 589 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 ELOA3BQ3SY89 546 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 AAED1Q7RTV5 226 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 DHDDSQ86SQ9 333 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 GPAT4Q86UL3 456 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 RETREG3Q86VR2 466 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 COMTD1Q86VU5 262 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 HIPK4Q8NE63 616 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 C1orf162Q8NEQ5 155 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 BHLHE22Q8NFJ8 381 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 KBTBD8Q8NFY9 601 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 ELOA3Q8NG57 546 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 OR52N5Q8NH56 324 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 NEUROG1Q92886 237 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 ANKRD27Q96NW4 1050 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 ZNF385AQ96PM9 386 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 TRIM2Q9C040 744 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 AMBRA1Q9C0C7 1298 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 LAMP3Q9UQV4 416 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 RASD1Q9Y272 281 aa17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 NIPBLQ6KC79 2804 aaeCLIP17.25■□□□□ 0.35
TSPAN4-209ENST00000409543 INHBBP09529 407 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 DANCRP0C864 163 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 PNMTP11086 282 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 HTR2AP28223 471 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 RPS4XP62701 263 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 TGFBR3Q03167 851 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 RBBP4Q09028 425 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 GLIPR1L2Q4G1C9 344 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 C1QTNF12Q5T7M4 302 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 C5orf46Q6UWT4 87 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 CREB3L2Q70SY1 520 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 C17orf78Q8N4C9 275 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 POMGNT2Q8NAT1 580 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 C11orf65Q8NCR3 313 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 SMAP2Q8WU79 429 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 DNAJA4Q8WW22 397 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 KTI12Q96EK9 354 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 RADILQ96JH8 1075 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 Q96MF0 132 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 CGREF1Q99674 301 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 PTDSS2Q9BVG9 487 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 SLCO5A1Q9H2Y9 848 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 EVA1AQ9H8M9 152 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 ANGPT4Q9Y264 503 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 USF3Q68DE3 2245 aa17.24■□□□□ 0.35
TSPAN4-209ENST00000409543 A0A1B0GWA3 101 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 SHISA9B4DS77 424 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 OVOL3O00110 214 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 FZD7O75084 574 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms