RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CPN1P15169 458 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 TNFRSF1BP20333 461 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 STARP49675 285 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 MANFP55145 182 aaKnown RBP11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 CASP9P55211 416 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 CDH12P55289 794 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 AQP6Q13520 282 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 UBE2UQ5VVX9 321 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 TIGD3Q6B0B8 471 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 PRSS57Q6UWY2 283 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 SIMC1Q8NDZ2 872 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 C7orf57Q8NEG2 295 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 FNDC8Q8TC99 324 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 TP53INP1Q96A56 240 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 HS3ST6Q96QI5 342 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 SFXN3Q9BWM7 321 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 UBTD1Q9HAC8 227 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 GALNT9Q9HCQ5 603 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 ACOT13Q9NPJ3 140 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 SIRT3Q9NTG7 399 aaPredicted RBP11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 ACER3Q9NUN7 267 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 TBC1D23Q9NUY8 699 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 FKBP14Q9NWM8 211 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 MS4A12Q9NXJ0 267 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 SNX8Q9Y5X2 465 aa11.44□□□□□ -0.58
CHRNA1-205ENST00000409542 NUP214P35658 2090 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 DSCAMO60469 2012 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 RAI1Q7Z5J4 1906 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 C5orf58C9J3I9 102 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 SNPHO15079 494 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 TNFSF13O75888 250 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 GADD45GO95257 159 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 SLC35E2P0CK97 266 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 CBLP22681 906 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 ABCD3P28288 659 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 MAP2K4P45985 399 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 OR1E2P47887 323 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 ALDH9A1P49189 494 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 FUT7Q11130 342 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 SPCS2Q15005 226 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 NNATQ16517 81 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 ACKR1Q16570 336 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 SPDYE7PQ495Y7 208 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 C22orf34Q6ZV56 151 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 OR1J4Q8NGS1 313 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 RHOXF1Q8NHV9 184 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 B4GALNT2Q8NHY0 566 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 SLC38A5Q8WUX1 472 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 TRUB1Q8WWH5 349 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 HGDQ93099 445 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 PIGTQ969N2 578 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 CTHRC1Q96CG8 243 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 PIK3IP1Q96FE7 263 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 SECISBP2Q96T21 854 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 FAIM2Q9BWQ8 316 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 NXF5Q9H1B4 397 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 ZNF556Q9HAH1 456 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 KLHL28Q9NXS3 571 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 CLCF1Q9UBD9 225 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 PSORS1C1Q9UIG5 152 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 PHF11Q9UIL8 331 aa11.43□□□□□ -0.58
CHRNA1-205ENST00000409542 STAB1Q9NY15 2570 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 ICOSLGO75144 302 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 AIFM1O95831 613 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 TGM6O95932 706 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 ACTL6AO96019 429 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 TFPTP0C1Z6 253 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 S1PR1P21453 382 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 LOXP28300 417 aaPredicted RBP11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 TLX1P31314 330 aaPredicted RBP11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 GALNSP34059 522 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 TBCEQ15813 527 aaPredicted RBP11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 SMN1Q16637 294 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 C6orf120Q7Z4R8 191 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 P2RY8Q86VZ1 359 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 WDSUB1Q8N9V3 476 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 FAM81AQ8TBF8 368 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 RASSF5Q8WWW0 418 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 WNT2BQ93097 391 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 MYDGFQ969H8 173 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 TMEM19Q96HH6 336 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 DHRS1Q96LJ7 313 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 UCN2Q96RP3 112 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 CCL19Q99731 98 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 TM9SF2Q99805 663 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 PELOQ9BRX2 385 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 OR10A5Q9H207 317 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 RLIMQ9NVW2 624 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 AASSQ9UDR5 926 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 NDRG3Q9UGV2 375 aa11.42□□□□□ -0.58
CHRNA1-205ENST00000409542 A0A1W2PNV4 684 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 CLDN24A6NM45 220 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 HMGN4O00479 90 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 GUCY1B2O75343 617 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 MFN2O95140 757 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 FADS2O95864 444 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 BCHEP06276 602 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 NR2F6P10588 404 aa11.41□□□□□ -0.58
CHRNA1-205ENST00000409542 NID1P14543 1247 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms