RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 IGHV1OR15-9A0A0B4J2B8 117 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 NAP1L6A6NFF2 107 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 TSPAN12O95859 305 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 JUNBP17275 347 aaPredicted RBP15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 ATP1B3P54709 279 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 FRMD1Q8N878 549 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 MICU1Q9BPX6 476 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 LAT2Q9GZY6 243 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 CDCP1Q9H5V8 836 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 F5H5K5 113 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 SLC16A6O15403 523 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 CHRM4P08173 479 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 PSMA6P60900 246 aaKnown RBP15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 DUSP8Q13202 625 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 CDK10Q15131 360 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 ATAD3CQ5T2N8 411 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 NXNL2Q5VZ03 156 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 MFSD8Q8NHS3 518 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 RPL3LQ92901 407 aaKnown RBP15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 SDF2Q99470 211 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 VRK1Q99986 396 aaPredicted RBP15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 DNTTIP1Q9H147 329 aa15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 ZNF701Q9NV72 531 aaPredicted RBP15.52■□□□□ 0.08
PCDHA13-202ENST00000409494 LINC01387J3KSC0 135 aa15.52■□□□□ 0.07
PCDHA13-202ENST00000409494 NXPH1P58417 271 aa15.52■□□□□ 0.07
PCDHA13-202ENST00000409494 HOXC5Q00444 222 aa15.52■□□□□ 0.07
PCDHA13-202ENST00000409494 SNTB2Q13425 540 aaKnown RBP15.52■□□□□ 0.07
PCDHA13-202ENST00000409494 NTRK2Q16620 822 aa15.52■□□□□ 0.07
PCDHA13-202ENST00000409494 AWAT2Q6E213 333 aa15.52■□□□□ 0.07
PCDHA13-202ENST00000409494 Q6ZNX1 250 aa15.52■□□□□ 0.07
PCDHA13-202ENST00000409494 DNAJA3Q96EY1 480 aa15.52■□□□□ 0.07
PCDHA13-202ENST00000409494 IL20RAQ9UHF4 553 aa15.52■□□□□ 0.07
PCDHA13-202ENST00000409494 SERTM1A2A2V5 107 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 M0R233 179 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 LGI1O95970 557 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 MAN2A2P49641 1150 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 ZNF628Q5EBL2 1059 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 IQCF2Q8IXL9 164 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 MKXQ8IYA7 352 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 NUDT15Q9NV35 164 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 MAB21L2Q9Y586 359 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 NUP205Q92621 2012 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 WDR90Q96KV7 1748 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 PRKACBP22694 351 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 DLSTP36957 453 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 MAGEA2P43356 314 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 PATE1Q8WXA2 126 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 THOC3Q96J01 351 aaKnown RBP15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 RYDENQ9NUL5 291 aaKnown RBP15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 KLHL9Q9P2J3 617 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 ATXN7L1Q9ULK2 861 aaPredicted RBP15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 TRAV27A0A087WT01 109 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 TP53P04637 393 aaPredicted RBP15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 ELAVL4P26378 380 aaKnown RBP15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 SMAD2Q15796 467 aaKnown RBP15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 HACD4Q5VWC8 232 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 H1FNTQ75WM6 255 aaPredicted RBP15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 TMED4Q7Z7H5 227 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 HMGCLL1Q8TB92 370 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 ZNF486Q96H40 463 aaPredicted RBP15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 HRASLS5Q96KN8 279 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 CCDC74BQ96LY2 380 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 KATNB1Q9BVA0 655 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 OR2A25A4D2G3 310 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 OR7A10O76100 309 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 HNRNPFP52597 415 aaKnown RBP15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 B4GALNT1Q00973 533 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 OR51L1Q8NGJ5 315 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 CCL4L1Q8NHW4 92 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 SARAFQ96BY9 339 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 ZNF175Q9Y473 711 aa15.51■□□□□ 0.07
PCDHA13-202ENST00000409494 TMPRSS11DO60235 418 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 WDPCPO95876 746 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 WNT11O96014 354 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 PRH1P02810 166 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 MAS1P04201 325 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 PRSS3P35030 304 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 SLC1A3P43003 542 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 PRAMEF20Q5VT98 475 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 FAM109BQ6ICB4 259 aaPredicted RBP15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 CCDC28AQ8IWP9 274 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 DNAJC22Q8N4W6 341 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 TEX19Q8NA77 164 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 ATAD5Q96QE3 1844 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 TMEM269A0A1B0GVZ9 245 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 A0A1W2PPK0 400 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 OR2AT4A6NND4 320 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 MKRN2OSH3BPM6 223 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 ADAM23O75077 832 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 SBK3P0C264 359 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 DNASE1P24855 282 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 PTGS2P35354 604 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 MECP2P51608 486 aaKnown RBP15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 DUSP5Q16690 384 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 TP53I3Q53FA7 332 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 C1orf140Q5VVS0 124 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 DLEU7Q6UYE1 221 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 LINC00696Q6ZRV3 163 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 STEAP2Q8NFT2 490 aa15.5■□□□□ 0.07
PCDHA13-202ENST00000409494 SLCO4A1Q96BD0 722 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms