RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 DNAJA1P31689 397 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 RBM34P42696 430 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 OMPP47874 163 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 UQCRFS1P47985 274 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 HMGA2P52926 109 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 PON3Q15166 354 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 ZNF74Q16587 644 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 LRRC36Q1X8D7 754 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 MICAQ29983 383 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 SLC46A3Q7Z3Q1 461 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 ZER1Q7Z7L7 766 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 EPHX4Q8IUS5 362 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 CCDC103Q8IW40 242 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 TMEM99Q8N816 258 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 AQP11Q8NBQ7 271 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 OR10G2Q8NGC3 310 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 OR13C2Q8NGS9 318 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 GIPC3Q8TF64 312 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 SGTBQ96EQ0 304 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 CENPNQ96H22 339 aaPredicted RBP12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 HS6ST2Q96MM7 605 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 CIB1Q99828 191 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 BDH2Q9BUT1 245 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 PRDM14Q9GZV8 571 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 ANKRD19PQ9H560 264 aa12.64□□□□□ -0.39
CHRNA1-204ENST00000409323 TRAV27A0A087WT01 109 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 M0R082 166 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 GASTP01350 101 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 SAGP10523 405 aaPredicted RBP12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 CPN1P15169 458 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 HOXB6P17509 224 aaKnown RBP12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 GRPRP30550 384 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 VHLP40337 213 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 NUP107P57740 925 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 IL1RL1Q01638 556 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 PRKCDQ05655 676 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 FAM69AQ5T7M9 428 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 PGBD2Q6P3X8 592 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 RPTNQ6XPR3 784 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 CHMP1BQ7LBR1 199 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 STK32CQ86UX6 486 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 OR51A7Q8NH64 312 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 OR5K1Q8NHB7 308 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 ZNF417Q8TAU3 575 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 FNDC9Q8TBE3 224 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 PIGXQ8TBF5 258 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 FAM57AQ8TBR7 257 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 MIB2Q96AX9 1013 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 ZNF775Q96BV0 537 aaPredicted RBP12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 ZNF587Q96SQ5 575 aaPredicted RBP12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 FEVQ99581 238 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 NIPSNAP1Q9BPW8 284 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 TAPBPLQ9BX59 468 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 POTEKPQ9BYX7 375 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 SMURF2Q9HAU4 748 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 IL20RAQ9UHF4 553 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 OSGIN2Q9Y236 505 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 HDGFL3Q9Y3E1 203 aa12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 RP1L1Q8IWN7 2480 aaPredicted RBP12.63□□□□□ -0.39
CHRNA1-204ENST00000409323 OR14I1A6ND48 311 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 FTCDNL1E5RQL4 147 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 C11orf98E9PRG8 122 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 G3V2T6 193 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 BCKDKO14874 412 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 SERPINI2O75830 405 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 OR7A10O76100 309 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 AQP8O94778 261 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 TGM6O95932 706 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 GTF2E2P29084 291 aaKnown RBP12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 BCL2A1Q16548 175 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 LPCAT4Q643R3 524 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 ZNF770Q6IQ21 691 aaPredicted RBP12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 DOLPP1Q86YN1 238 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 ST6GALNAC3Q8NDV1 305 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 KLHL4Q9C0H6 718 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 NANSQ9NR45 359 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 CLEC4AQ9UMR7 237 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 MED12LQ86YW9 2145 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 ARHGAP21Q5T5U3 1957 aa12.62□□□□□ -0.39
CHRNA1-204ENST00000409323 TRGV8A0A0C4DH27 118 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 EFCAB9A8MZ26 197 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 BLOC1S5-TXNDC5H3BN57 136 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 SMAD9O15198 467 aaKnown RBP12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 PMS2P2O95744 297 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 IGFBP1P08833 259 aaPredicted RBP12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 GNLYP22749 145 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 RPS3AP61247 264 aaKnown RBP12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 ZNF239Q16600 458 aaKnown RBP12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 EIF2S3LQ2VIR3 472 aaKnown RBP12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 ACSF3Q4G176 576 aaPredicted RBP12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 PDSS1Q5T2R2 415 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 OGFRL1Q5TC84 451 aaPredicted RBP12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 RTL6Q6ICC9 239 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 SHQ1Q6PI26 577 aaKnown RBP12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 GALNT5Q7Z7M9 940 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 GPAT4Q86UL3 456 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 IGFN1Q86VF2 1251 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 PM20D2Q8IYS1 436 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 MFSD8Q8NHS3 518 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 ABHD3Q8WU67 409 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms