RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ZNF317Q96PQ6 595 aaPredicted RBP8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 TRIM2Q9C040 744 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 SLCO5A1Q9H2Y9 848 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 TMEM38AQ9H6F2 299 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 SLCO1B3Q9NPD5 702 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 OBP2BQ9NPH6 170 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 SLC6A13Q9NSD5 602 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ZNF701Q9NV72 531 aaPredicted RBP8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 RLIMQ9NVW2 624 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 LEF1Q9UJU2 399 aaPredicted RBP8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 POU2F3Q9UKI9 436 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 LAMP3Q9UQV4 416 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ANGPT4Q9Y264 503 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ACANP16112 2415 aa8.02□□□□□ -1.13
SNORD88A-201ENST00000408314 ROS1P08922 2347 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 TMEM229AB2RXF0 380 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 ABCD4O14678 606 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 FRS3O43559 492 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 MPGP29372 298 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 ACAA2P42765 397 aaKnown RBP8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 SH3BGRP55822 239 aaPredicted RBP8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 PRPS1P60891 318 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 RBBP4Q09028 425 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 FAPQ12884 760 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 SCARB2Q14108 478 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 SLC17A1Q14916 467 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 TSC22D1Q15714 1073 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 MAPK11Q15759 364 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 NRF1Q16656 503 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 TTMPQ5BVD1 217 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 RPS26P11Q5JNZ5 115 aaPredicted RBP8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 SWT1Q5T5J6 900 aaKnown RBP8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 AGAP6Q5VW22 663 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 METTL21CQ5VZV1 264 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 FAM91A1Q658Y4 838 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 DHRS4L2Q6PKH6 230 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 C6orf89Q6UWU4 347 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 CLEC9AQ6UXN8 241 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 NET1Q7Z628 596 aaPredicted RBP8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 DHDDSQ86SQ9 333 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 ATG4DQ86TL0 474 aaPredicted RBP8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 SERPINA11Q86U17 422 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 GPAT4Q86UL3 456 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 RANBP3LQ86VV4 465 aaPredicted RBP8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 CCDC103Q8IW40 242 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 LSMEM1Q8N8F7 131 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 OR9K2Q8NGE7 335 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 MFSD8Q8NHS3 518 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 SMAP2Q8WU79 429 aaPredicted RBP8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 CKAP2Q8WWK9 683 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 SLC38A4Q969I6 547 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 C3orf49Q96BT1 292 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 ZNF775Q96BV0 537 aaPredicted RBP8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 MUS81Q96NY9 551 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 EPYCQ99645 322 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 EBF4Q9BQW3 602 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 AMBRA1Q9C0C7 1298 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 GRIP2Q9C0E4 1043 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 FKRPQ9H9S5 495 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 ADPRHL2Q9NX46 363 aa8.01□□□□□ -1.13
SNORD88A-201ENST00000408314 FREM1Q5H8C1 2179 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 ZC3H12DA2A288 527 aaKnown RBP8□□□□□ -1.13
SNORD88A-201ENST00000408314 ZNF587BE7ETH6 402 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 AIM2O14862 343 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 AKR7A3O95154 331 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 PLAUP00749 431 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 IGHV3-9P01782 118 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 C1QCP02747 245 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 HEXAP06865 529 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 TROVE2P10155 538 aaKnown RBP eCLIP8□□□□□ -1.13
SNORD88A-201ENST00000408314 HOXB9P17482 250 aaPredicted RBP8□□□□□ -1.13
SNORD88A-201ENST00000408314 GPX2P18283 190 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 RGS8P57771 180 aaPredicted RBP8□□□□□ -1.13
SNORD88A-201ENST00000408314 CYP51A1Q16850 503 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 ALG10BQ5I7T1 473 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 FAM69AQ5T7M9 428 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 INTS11Q5TA45 600 aaKnown RBP8□□□□□ -1.13
SNORD88A-201ENST00000408314 ZNF544Q6NX49 715 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 ULK3Q6PHR2 472 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 SLC22A25Q6T423 547 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 ZC3HAV1Q7Z2W4 902 aaKnown RBP8□□□□□ -1.13
SNORD88A-201ENST00000408314 KRTAP1-3Q8IUG1 177 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 ARMC8Q8IUR7 673 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 CLIP4Q8N3C7 705 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 C11orf65Q8NCR3 313 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 HIPK4Q8NE63 616 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 KBTBD8Q8NFY9 601 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 OR52E4Q8NGH9 312 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 OR52N5Q8NH56 324 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 NFKBIDQ8NI38 313 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 RASSF5Q8WWW0 418 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 IGFBPL1Q8WX77 278 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 SLC47A1Q96FL8 570 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 ADAD1Q96M93 576 aaKnown RBP8□□□□□ -1.13
SNORD88A-201ENST00000408314 HS6ST2Q96MM7 605 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 KCNS3Q9BQ31 491 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 TMEM27Q9HBJ8 222 aa8□□□□□ -1.13
SNORD88A-201ENST00000408314 CISD1Q9NZ45 108 aaKnown RBP8□□□□□ -1.13
SNORD88A-201ENST00000408314 RCE1Q9Y256 329 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms