RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TSPO2Q5TGU0 170 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 PRAMEF8Q5VWM4 474 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 PRAMEF7Q5VXH5 474 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 OR9K2Q8NGE7 335 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 NFKBIDQ8NI38 313 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 BBS10Q8TAM1 723 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 MUS81Q96NY9 551 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 ZNF385AQ96PM9 386 aaKnown RBP16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 IKZF5Q9H5V7 419 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 CACYBPQ9HB71 228 aaKnown RBP16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 INTS9Q9NV88 658 aaKnown RBP16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 SLC25A15Q9Y619 301 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 AQP7P3A6NL99 342 aa16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 C5orf58C9J3I9 102 aa16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 TMCC2O75069 709 aa16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 ZNF83P51522 516 aa16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 AGKQ53H12 422 aa16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 C1orf140Q5VVS0 124 aa16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 GPAT4Q86UL3 456 aa16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 COMTD1Q86VU5 262 aa16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 THOC1Q96FV9 657 aaKnown RBP16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 ARMC7Q9H6L4 198 aa16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 PARPBPQ9NWS1 579 aa16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 CISD1Q9NZ45 108 aaKnown RBP16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 PRDM4Q9UKN5 801 aa16.96■□□□□ 0.3
SMARCB1-204ENST00000407422 TRBV5-3A0A0A0MS03 114 aa16.95■□□□□ 0.3
SMARCB1-204ENST00000407422 TMEM229AB2RXF0 380 aa16.95■□□□□ 0.3
SMARCB1-204ENST00000407422 NPIPB7O75200 414 aa16.95■□□□□ 0.3
SMARCB1-204ENST00000407422 CDKN1AP38936 164 aa16.95■□□□□ 0.3
SMARCB1-204ENST00000407422 P2RY4P51582 365 aa16.95■□□□□ 0.3
SMARCB1-204ENST00000407422 KRTAP21-3Q3LHN1 58 aa16.95■□□□□ 0.3
SMARCB1-204ENST00000407422 GCNT6Q5T4J0 391 aa16.95■□□□□ 0.3
SMARCB1-204ENST00000407422 C1QTNF6Q9BXI9 259 aa16.95■□□□□ 0.3
SMARCB1-204ENST00000407422 UPB1Q9UBR1 384 aa16.95■□□□□ 0.3
SMARCB1-204ENST00000407422 A0A1W2PP18 115 aa16.94■□□□□ 0.3
SMARCB1-204ENST00000407422 HEXAP06865 529 aa16.94■□□□□ 0.3
SMARCB1-204ENST00000407422 ARAFP10398 606 aa16.94■□□□□ 0.3
SMARCB1-204ENST00000407422 ETS2P15036 469 aa16.94■□□□□ 0.3
SMARCB1-204ENST00000407422 SPOCK1Q08629 439 aa16.94■□□□□ 0.3
SMARCB1-204ENST00000407422 SSX8Q7RTT4 187 aa16.94■□□□□ 0.3
SMARCB1-204ENST00000407422 TMEM45BQ96B21 275 aa16.94■□□□□ 0.3
SMARCB1-204ENST00000407422 SF3B5Q9BWJ5 86 aaKnown RBP16.94■□□□□ 0.3
SMARCB1-204ENST00000407422 TAPBPLQ9BX59 468 aa16.94■□□□□ 0.3
SMARCB1-204ENST00000407422 HMGB1P1B2RPK0 211 aaPredicted RBP16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 CD8AP01732 235 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 PTNP21246 168 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 ATP4BP51164 291 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 CDH11P55287 796 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 CDK6Q00534 326 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 EGR4Q05215 589 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 SQLEQ14534 574 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 TMEM225Q6GV28 225 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 OR7E24Q6IFN5 339 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 AAED1Q7RTV5 226 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 HDXQ7Z353 690 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 PIAS4Q8N2W9 510 aaPredicted RBP16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 WDR31Q8NA23 367 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 CKAP2Q8WWK9 683 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 GTPBP3Q969Y2 492 aaKnown RBP16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 PRR14Q9BWN1 585 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 AMBRA1Q9C0C7 1298 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 HIVEP2P31629 2446 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 JMJD1CQ15652 2540 aa16.93■□□□□ 0.3
SMARCB1-204ENST00000407422 TPST1O60507 370 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 HTR2AP28223 471 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 PRKAR1BP31321 381 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 SLC25A3Q00325 362 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 LGALS3BPQ08380 585 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 REEP3Q6NUK4 255 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 TMEM108Q6UXF1 575 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 DLEU7Q6UYE1 221 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 STK35Q8TDR2 534 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 SLC35B4Q969S0 331 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 KTI12Q96EK9 354 aaPredicted RBP16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 PTDSS2Q9BVG9 487 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 DCTN4Q9UJW0 460 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 GMEB1Q9Y692 573 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 FAM171A2A8MVW0 826 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 FTCDNL1E5RQL4 147 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 M0R1B8 84 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 NDUFS7O75251 213 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 PPIBP23284 216 aaKnown RBP16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 CD40P25942 277 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 RPS5P46782 204 aaKnown RBP16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 TNK1Q13470 666 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 ADRM1Q16186 407 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 KDM8Q8N371 416 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 SLC25A36Q96CQ1 311 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 MAGEB18Q96M61 343 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 TRAF4Q9BUZ4 470 aaPredicted RBP16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 SLCO5A1Q9H2Y9 848 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 TMEM45AQ9NWC5 275 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 SEC14L4Q9UDX3 406 aa16.92■□□□□ 0.3
SMARCB1-204ENST00000407422 ABCA2Q9BZC7 2435 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 E7EQL1 145 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 AHSA1O95433 338 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 H2AFXP16104 143 aaPredicted RBP16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 GPX2P18283 190 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 CDH2P19022 906 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms