RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 POU3F2P20265 443 aaPredicted RBP11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 RPS19P39019 145 aaKnown RBP11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 PPP3R1P63098 170 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 ACTC1P68032 377 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 ACTA1P68133 377 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 HOXC5Q00444 222 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 LGALS3BPQ08380 585 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 ERV3-1Q14264 604 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 FGFBP1Q14512 234 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 MAPK14Q16539 360 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 EIF2S3LQ2VIR3 472 aaKnown RBP11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 DDI2Q5TDH0 399 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 LCN1P1Q5VSP4 162 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 YOD1Q5VVQ6 348 aaPredicted RBP11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 METAP1DQ6UB28 335 aaPredicted RBP11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 QSOX2Q6ZRP7 698 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 TTLL10Q6ZVT0 673 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 MED25Q71SY5 747 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 PRSS41Q7RTY9 318 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 MAMDC2Q7Z304 686 aaPredicted RBP11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 TIPARPQ7Z3E1 657 aaKnown RBP11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 CPOQ8IVL8 374 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 ARHGEF39Q8N4T4 335 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC38A9Q8NBW4 561 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 TMEM52Q8NDY8 209 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 PRR7Q8TB68 274 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 ART5Q96L15 291 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 KCNS3Q9BQ31 491 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 IFT27Q9BW83 186 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC19A3Q9BZV2 496 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 SNTG1Q9NSN8 517 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 CUTCQ9NTM9 273 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 ERVK13-1Q9NX77 482 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 CBLCQ9ULV8 474 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 OR10H1Q9Y4A9 318 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 KCNMB2Q9Y691 235 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 LRBAP50851 2863 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 MED13Q9UHV7 2174 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 POLQO75417 2590 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 GXYLT2A0PJZ3 443 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 IDH3BO43837 385 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 PIP5K1CO60331 668 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 DNAJB6O75190 326 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 IGF2P01344 180 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 THY1P04216 161 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 CT62P0C5K7 136 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 GKN3PP0CG01 181 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 LIMS3P0CW19 117 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 LIMS4P0CW20 117 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 S1PR1P21453 382 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 F8A1P23610 371 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 TNFSF8P32971 234 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 SOX18P35713 384 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 EMDP50402 254 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 PSMD7P51665 324 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 DCAF7P61962 342 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 PSPHP78330 225 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 FUT7Q11130 342 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 ZNF267Q14586 743 aaPredicted RBP11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 PDZK1Q5T2W1 519 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 C1orf189Q5VU69 101 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 RHBDD2Q6NTF9 364 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 XKRXQ6PP77 449 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 CD200R1LQ6Q8B3 271 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 C6orf15Q6UXA7 325 aaPredicted RBP11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 BCDIN3DQ7Z5W3 292 aaKnown RBP11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 BTLAQ7Z6A9 289 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 OAFQ86UD1 273 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 ZNF614Q8N883 585 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 GDPD1Q8N9F7 314 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 GATAD2BQ8WXI9 593 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 ACOT12Q8WYK0 555 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 MMABQ96EY8 250 aaPredicted RBP11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 PEX11GQ96HA9 241 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 SECISBP2Q96T21 854 aaKnown RBP11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 SPRY4Q9C004 299 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 TRIM36Q9NQ86 728 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 HAO2Q9NYQ3 351 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 DHCR7Q9UBM7 475 aaKnown RBP11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 GPR52Q9Y2T5 361 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 TMEM184BQ9Y519 407 aaPredicted RBP11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 SEC16AO15027 2179 aa11.79□□□□□ -0.52
SMARCB1-203ENST00000407082 A0A1B0GWA3 101 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 A0A1B0GX78 115 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 DAPL1A0PJW8 107 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 MEN1O00255 615 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 PEX12O00623 359 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 BHLHE40O14503 412 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 FOXS1O43638 330 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 PTP4A3O75365 173 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 LYPD3O95274 346 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 DDAH2O95865 285 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 DLGAP3O95886 979 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 CH25HO95992 272 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 MT-ND5P03915 603 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 IFNA16P05015 189 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 KLK3P07288 261 aaPredicted RBP11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 ADRA2AP08913 450 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms