RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 IFNGP01579 166 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 TFP02787 698 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 ZNF806P0C7X5 589 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 SLC6A6P31641 620 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 PPP1CAP62136 330 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 ACTC1P68032 377 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 ACTA1P68133 377 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 ZCCHC12Q6PEW1 402 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 ESPNLQ6ZVH7 1005 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 ZNF761Q86XN6 746 aaPredicted RBP13.97□□□□□ -0.17
LIMK2-204ENST00000406516 CSNK1A1LQ8N752 337 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 OR4D9Q8NGE8 314 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 ZFP3Q96NJ6 502 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 PRDM9Q9NQV7 894 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 ST6GALNAC2Q9UJ37 374 aa13.97□□□□□ -0.17
LIMK2-204ENST00000406516 TNFRSF10CO14798 259 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 GALR3O60755 368 aaPredicted RBP13.96□□□□□ -0.17
LIMK2-204ENST00000406516 SDC3O75056 442 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 RDH16O75452 317 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 HIST1H1CP16403 213 aaKnown RBP13.96□□□□□ -0.17
LIMK2-204ENST00000406516 ATF1P18846 271 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 GNG2P59768 71 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 BTG1P62324 171 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 C1orf61Q13536 156 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 FHL1Q13642 323 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 SHBQ15464 509 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 ARHGAP11AQ6P4F7 1023 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 LYPD4Q6UWN0 246 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 BAHD1Q8TBE0 780 aaPredicted RBP13.96□□□□□ -0.17
LIMK2-204ENST00000406516 ANKRD9Q96BM1 317 aaPredicted RBP13.96□□□□□ -0.17
LIMK2-204ENST00000406516 ELF4Q99607 663 aaPredicted RBP13.96□□□□□ -0.17
LIMK2-204ENST00000406516 MED28Q9H204 178 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 GAREM1Q9H706 876 aa13.96□□□□□ -0.17
LIMK2-204ENST00000406516 LRRN3E7EW58 273 aa13.96□□□□□ -0.18
LIMK2-204ENST00000406516 HCRTR1O43613 425 aa13.96□□□□□ -0.18
LIMK2-204ENST00000406516 CELA2BP08218 269 aaPredicted RBP13.96□□□□□ -0.18
LIMK2-204ENST00000406516 DEFB110Q30KQ9 67 aa13.96□□□□□ -0.18
LIMK2-204ENST00000406516 SLC36A2Q495M3 483 aa13.96□□□□□ -0.18
LIMK2-204ENST00000406516 THAP4Q8WY91 577 aa13.96□□□□□ -0.18
LIMK2-204ENST00000406516 CTHRC1Q96CG8 243 aa13.96□□□□□ -0.18
LIMK2-204ENST00000406516 LRRN3Q9H3W5 708 aa13.96□□□□□ -0.18
LIMK2-204ENST00000406516 BRD7Q9NPI1 651 aa13.96□□□□□ -0.18
LIMK2-204ENST00000406516 HRASLS2Q9NWW9 162 aa13.96□□□□□ -0.18
LIMK2-204ENST00000406516 DNAJB12Q9NXW2 375 aaKnown RBP13.96□□□□□ -0.18
LIMK2-204ENST00000406516 HAO2Q9NYQ3 351 aa13.96□□□□□ -0.18
LIMK2-204ENST00000406516 FABP7O15540 132 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 TSC22D2O75157 780 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 NKX2-2O95096 273 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 IGKV1D-16P01601 117 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 CTSBP07858 339 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 NME1P15531 152 aaKnown RBP13.95□□□□□ -0.18
LIMK2-204ENST00000406516 ACAA2P42765 397 aaKnown RBP13.95□□□□□ -0.18
LIMK2-204ENST00000406516 GDI2P50395 445 aaKnown RBP13.95□□□□□ -0.18
LIMK2-204ENST00000406516 DGCR2P98153 550 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 FAM53BQ14153 422 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 CCDC58Q4VC31 144 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 MTFR2Q6P444 385 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 TOMM5Q8N4H5 51 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 MS4A15Q8N5U1 240 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 ZNF655Q8N720 491 aaPredicted RBP13.95□□□□□ -0.18
LIMK2-204ENST00000406516 PELI1Q96FA3 418 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 CCDC3Q9BQI4 270 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 BAIAP2Q9UQB8 552 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 ADAM18Q9Y3Q7 739 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 RIF1Q5UIP0 2472 aaKnown RBP13.95□□□□□ -0.18
LIMK2-204ENST00000406516 C2orf74A8MZ97 194 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 DHFRP00374 187 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 TNFP01375 233 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 PSG6Q00889 435 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 NNATQ16517 81 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 NDUFAF6Q330K2 333 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 GXYLT1Q4G148 440 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 LRRC17Q8N6Y2 441 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 BMPERQ8N8U9 685 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 SLC2A12Q8TD20 617 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 CITED4Q96RK1 184 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 DPAGT1Q9H3H5 408 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 UCKL1Q9NWZ5 548 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 ZNF222Q9UK12 451 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 IER3IP1Q9Y5U9 82 aa13.95□□□□□ -0.18
LIMK2-204ENST00000406516 NOTOA8MTQ0 251 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 SYPP08247 313 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 POU4F2Q12837 409 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 KIRREL2Q6UWL6 708 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 SIAH3Q8IW03 269 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 OR9A4Q8NGU2 314 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 YIPF5Q969M3 257 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 OR14A2Q96R54 314 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 ZNF426Q9BUY5 554 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 TRIM2Q9C040 744 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 GNG8Q9UK08 70 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 AK6Q9Y3D8 172 aaKnown RBP13.94□□□□□ -0.18
LIMK2-204ENST00000406516 ADAMTS9Q9P2N4 1935 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 MCIDASD6RGH6 385 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 HRKO00198 91 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 IMPA2O14732 288 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 FLRT2O43155 660 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 CDC123O75794 336 aaPredicted RBP13.94□□□□□ -0.18
LIMK2-204ENST00000406516 GIFP27352 417 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 ILF3Q12906 894 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■■■■□ 22.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms