RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 TMEM80Q96HE8 168 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 C18orf12Q96KH6 178 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 CAPZA3Q96KX2 299 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 C12orf66Q96MD2 445 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 AMDHD1Q96NU7 426 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 SLC6A7Q99884 636 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 RBM4BQ9BQ04 359 aaKnown RBP3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 LXNQ9BS40 222 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 TIPINQ9BVW5 301 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 HCAR1Q9BXC0 346 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 KRTAP1-5Q9BYS1 174 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 PKIBQ9C010 78 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 TRIM15Q9C019 465 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZBP1Q9H171 429 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 NXF5Q9H1B4 397 aaKnown RBP3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 OPN3Q9H1Y3 402 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 FN3KRPQ9HA64 309 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 AGPAT3Q9NRZ7 376 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 HYOU1Q9Y4L1 999 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 COL4A5P29400 1685 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 SLX4Q8IY92 1834 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZSCAN5BA6NJL1 495 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 CCNE2O96020 404 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 CAPN1P07384 714 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 CT45A10P0DMU9 189 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 PNMTP11086 282 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 ACADSP16219 412 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 LAP3P28838 519 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 YWHABP31946 246 aaKnown RBP3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 CDH5P33151 784 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 ETV5P41161 510 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 ELK3P41970 407 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 BDKRB1P46663 353 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 PSMC5P62195 406 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 SNRPFP62306 86 aaKnown RBP3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 RPL8P62917 257 aaKnown RBP3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 GTF2BQ00403 316 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 RAB40BQ12829 278 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 NDUFA9Q16795 377 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 CEP85LQ5SZL2 805 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 GFI1BQ5VTD9 330 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 OLFML2AQ68BL7 652 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 PVRIGQ6DKI7 326 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 CYS1Q717R9 158 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 TRPV1Q8NER1 839 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 OR4D5Q8NGN0 318 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 VN1R17PQ8TDU5 208 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 PIGCQ92535 297 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 RPL3LQ92901 407 aaKnown RBP3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 C12orf42Q96LP6 360 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 OR5B2Q96R09 309 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 ADNPQ9H2P0 1102 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 SGK2Q9HBY8 427 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 NANSQ9NR45 359 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 PXMP2Q9NR77 195 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 NUDT15Q9NV35 164 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 NMRK1Q9NWW6 199 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 GCNT4Q9P109 453 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 DNAJC12Q9UKB3 198 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 CDH9Q9ULB4 789 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 RASD1Q9Y272 281 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 PRSS21Q9Y6M0 314 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 FOCADQ5VW36 1801 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 ADAMTSL1Q8N6G6 1762 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 FER1L5A0AVI2 2057 aa3.79□□□□□ -1.8
HMGB3P18-201ENST00000406327 MYH1P12882 1939 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 CNTNAP2Q9UHC6 1331 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 LRRIQ3A6PVS8 624 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 B4DXG7 233 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 F8VZ95 297 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 H3BQF6 201 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 POLR3GO15318 223 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 F10P00742 488 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 CD55P08174 381 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 CCDC172P0C7W6 258 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 NCF2P19878 526 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 IMPDH1P20839 514 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 SERPINA2P20848 420 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 ALDH3B2P48448 385 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 DHPSP49366 369 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 EFNA3P52797 238 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 CD300CQ08708 224 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 C2orf54Q08AI8 447 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 CYLC2Q14093 348 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 CASP8Q14790 479 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 SLC10A1Q14973 349 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 LTB4RQ15722 352 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 SSX2Q16385 188 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 CFAP221Q4G0U5 840 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 NHLRC3Q5JS37 347 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 C1orf220Q5T0J3 134 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 KCNIP4Q6PIL6 250 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 PAQR6Q6TCH4 344 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 H2AFVQ71UI9 128 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 OTUD6AQ7L8S5 288 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 TGIF2LXQ8IUE1 241 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 MCOLN2Q8IZK6 566 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 CLEC4FQ8N1N0 589 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 Q8N377 158 aa3.78□□□□□ -1.8
HMGB3P18-201ENST00000406327 MTURNQ8N3F0 131 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms