RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PRB1P04280 392 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 HIST1H2ABP04908 130 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 CCNA2P20248 432 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 ITGA3P26006 1051 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 EIF1P41567 113 aaKnown RBP19.02■□□□□ 0.63
TPM1-208ENST00000404484 ALDH3B2P48448 385 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 MASP1P48740 699 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 RPS4XP62701 263 aaKnown RBP19.02■□□□□ 0.63
TPM1-208ENST00000404484 HIST3H2AQ7L7L0 130 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 PRSS48Q7RTY5 328 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 BEST3Q8N1M1 668 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 OR6S1Q8NH40 331 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 HIST1H2ACQ93077 130 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 NTNG2Q96CW9 530 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 TMEM41AQ96HV5 264 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 COPS4Q9BT78 406 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 CCDC90BQ9GZT6 254 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 SACM1LQ9NTJ5 587 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 PAK1IP1Q9NWT1 392 aaPredicted RBP19.02■□□□□ 0.63
TPM1-208ENST00000404484 STMN3Q9NZ72 180 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 CHRNA9Q9UGM1 479 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 VDAC3Q9Y277 283 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 RPL36Q9Y3U8 105 aaKnown RBP19.02■□□□□ 0.63
TPM1-208ENST00000404484 SPIN1Q9Y657 262 aaPredicted RBP19.02■□□□□ 0.63
TPM1-208ENST00000404484 MED13Q9UHV7 2174 aa19.02■□□□□ 0.63
TPM1-208ENST00000404484 BSNQ9UPA5 3926 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 SMIM31A0A1B0GVY4 71 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 ZNF208O43345 1280 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 OR2T1O43869 369 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 ENTPD6O75354 484 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 AHSA1O95433 338 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 GTF2A1P52655 376 aaPredicted RBP19.01■□□□□ 0.63
TPM1-208ENST00000404484 PLPPR5Q32ZL2 321 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 ARHGAP11AQ6P4F7 1023 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 THSD4Q6ZMP0 1018 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 KCTD8Q6ZWB6 473 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 AHSA2Q719I0 299 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 SPARTQ8N0X7 666 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 WDSUB1Q8N9V3 476 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 RFKQ969G6 155 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 KTI12Q96EK9 354 aaPredicted RBP19.01■□□□□ 0.63
TPM1-208ENST00000404484 C1GALT1C1Q96EU7 318 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 DTNBP1Q96EV8 351 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 LRR1Q96L50 414 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 FN3KQ9H479 309 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 SERINC1Q9NRX5 453 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 FKBP14Q9NWM8 211 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 DNAJC27Q9NZQ0 273 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 IL20RAQ9UHF4 553 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 HIF3AQ9Y2N7 669 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 COL6A6A6NMZ7 2263 aa19.01■□□□□ 0.63
TPM1-208ENST00000404484 TMEM72A0PK05 275 aa19■□□□□ 0.63
TPM1-208ENST00000404484 NPIPB7O75200 414 aa19■□□□□ 0.63
TPM1-208ENST00000404484 IFNGP01579 166 aa19■□□□□ 0.63
TPM1-208ENST00000404484 ASAH2BP0C7U1 165 aa19■□□□□ 0.63
TPM1-208ENST00000404484 PIPP12273 146 aaPredicted RBP19■□□□□ 0.63
TPM1-208ENST00000404484 ADH6P28332 368 aa19■□□□□ 0.63
TPM1-208ENST00000404484 NUDT6P53370 316 aa19■□□□□ 0.63
TPM1-208ENST00000404484 FOXF1Q12946 379 aa19■□□□□ 0.63
TPM1-208ENST00000404484 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19■□□□□ 0.639e-6■■■■□ 24.9
TPM1-208ENST00000404484 SYT14P1Q58G82 188 aa19■□□□□ 0.63
TPM1-208ENST00000404484 FAM69AQ5T7M9 428 aa19■□□□□ 0.63
TPM1-208ENST00000404484 ARSKQ6UWY0 536 aa19■□□□□ 0.63
TPM1-208ENST00000404484 DPY19L2P2Q6ZN68 376 aa19■□□□□ 0.63
TPM1-208ENST00000404484 ZBTB8AQ96BR9 441 aa19■□□□□ 0.63
TPM1-208ENST00000404484 TIMMDC1Q9NPL8 285 aa19■□□□□ 0.63
TPM1-208ENST00000404484 CMC2Q9NRP2 79 aa19■□□□□ 0.63
TPM1-208ENST00000404484 PCDHGB1Q9Y5G3 927 aa19■□□□□ 0.63
TPM1-208ENST00000404484 IRGMA1A4Y4 181 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 RIIAD1A6NNX1 92 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 HTR1AP08908 422 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 PEPDP12955 493 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 JUNBP17275 347 aaPredicted RBP18.99■□□□□ 0.63
TPM1-208ENST00000404484 FKBP2P26885 142 aaKnown RBP18.99■□□□□ 0.63
TPM1-208ENST00000404484 TTKP33981 857 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 OC90Q02509 493 aaPredicted RBP18.99■□□□□ 0.63
TPM1-208ENST00000404484 MVKQ03426 396 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 FHL1Q13642 323 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 MFSD13AQ14CX5 517 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 NADK2Q4G0N4 442 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 ZNF468Q5VIY5 522 aaPredicted RBP18.99■□□□□ 0.63
TPM1-208ENST00000404484 C1orf140Q5VVS0 124 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 MAMDC2Q7Z304 686 aaPredicted RBP18.99■□□□□ 0.63
TPM1-208ENST00000404484 NANOGNBQ7Z5D8 188 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 STX19Q8N4C7 294 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 LRRC17Q8N6Y2 441 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 OR1J4Q8NGS1 313 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 GGHQ92820 318 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 TAAR8Q969N4 342 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 DDIT4LQ96D03 193 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 GPX7Q96SL4 187 aaPredicted RBP18.99■□□□□ 0.63
TPM1-208ENST00000404484 ERVK-18Q9QC07 812 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 SLC6A5Q9Y345 797 aa18.99■□□□□ 0.63
TPM1-208ENST00000404484 KDM4EB2RXH2 506 aaPredicted RBP18.98■□□□□ 0.63
TPM1-208ENST00000404484 B4DXG7 233 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 LRRN3E7EW58 273 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 PRODHO43272 600 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 IDH3BO43837 385 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 BGLAPP02818 100 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 HK1P19367 917 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms