RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 IGLV3-19P01714 112 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 ADRB3P13945 408 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 OGNP20774 298 aaKnown RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 DRD3P35462 400 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 CAPGP40121 348 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 ETV5P41161 510 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 SPINT3P49223 89 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 SERPINB9P50453 376 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 ATP4BP51164 291 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 STC1P52823 247 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 CRYBA2P53672 197 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 CRADDP78560 199 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 GALK2Q01415 458 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 PAX8Q06710 450 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 SIGLEC14Q08ET2 396 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 DNAJC3Q13217 504 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 CST6Q15828 149 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 TMEM52BQ4KMG9 183 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 DCAF12Q5T6F0 453 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 PIP5KL1Q5T9C9 394 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 LRRC66Q68CR7 880 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 NEK5Q6P3R8 708 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 SLC26A11Q86WA9 606 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 MMAAQ8IVH4 418 aaKnown RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 Q8N377 158 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 SPEM1Q8N4L4 309 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 SIDT2Q8NBJ9 832 aaKnown RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 OR4L1Q8NH43 312 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 BLOC1S5Q8TDH9 187 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 GLYATL1Q969I3 302 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 MRPL24Q96A35 216 aaKnown RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 NABP1Q96AH0 204 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZNF597Q96LX8 424 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZIM3Q96PE6 472 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 S1PR3Q99500 378 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 CCDC28BQ9BUN5 200 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 WWP1Q9H0M0 922 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 MFSD1Q9H3U5 465 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 DCLRE1BQ9H816 532 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 VPS37BQ9H9H4 285 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 DDX28Q9NUL7 540 aaKnown RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZNF446Q9NWS9 450 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 EURLQ9NYK6 297 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 TECRQ9NZ01 308 aaKnown RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 AKAP7Q9P0M2 348 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZNF346Q9UL40 294 aaKnown RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 NDRG2Q9UN36 371 aaKnown RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 KMT2EQ8IZD2 1858 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZNF318Q5VUA4 2279 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 BDP1A6H8Y1 2624 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 VCANP13611 3396 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 HEATR5BQ9P2D3 2071 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 TRBV5-4A0A0C4DH59 114 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 GOLGA6L10A6NI86 522 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 K7EQG2 157 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 TLR4O00206 839 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 SLC28A1O00337 649 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 RASGRF2O14827 1237 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 PFDN6O15212 129 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 VAPBO95292 243 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 PNPP00491 289 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 ALPIP09923 528 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 PIRTP0C851 137 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 TPBGLP0DKB5 382 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 GABRG2P18507 467 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 CD9P21926 228 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 TEAD1P28347 426 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 HOXA6P31267 233 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 FOXN2P32314 431 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 NUDT1P36639 197 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 SPAM1P38567 509 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 P2RY2P41231 377 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 PSMD8P48556 350 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 TTPAP49638 278 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 RPL27P61353 136 aaKnown RBP4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 RPS21P63220 83 aaKnown RBP4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 XIAPP98170 497 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 IFFO1Q0D2I5 559 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 PEX6Q13608 980 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 ITIH4Q14624 930 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 MEF2DQ14814 521 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 OR1C1Q15619 314 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 LPAL2Q16609 132 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 ECSCRQ19T08 205 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 KRT71Q3SY84 523 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 HSP90AA5PQ58FG0 334 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 TNFAIP8L3Q5GJ75 292 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 LGSNQ5TDP6 509 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 AGBL2Q5U5Z8 902 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 AFTPHQ6ULP2 937 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 CES3Q6UWW8 571 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 CERS6Q6ZMG9 384 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 SNX20Q7Z614 316 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 HDDC3Q8N4P3 179 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 RELL2Q8NC24 303 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 OR4K2Q8NGD2 314 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 OR13C4Q8NGS5 318 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 OR6F1Q8NGZ6 308 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms