RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 LRP11Q86VZ4 500 aa10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 EPHX4Q8IUS5 362 aa10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 RIMKLAQ8IXN7 391 aa10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 CLECL1Q8IZS7 167 aa10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 OR4F15Q8NGB8 312 aa10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ZNF563Q8TA94 476 aa10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 CKAP2Q8WWK9 683 aa10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 C3orf30Q96M34 536 aa10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 TMPRSS13Q9BYE2 586 aa10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 MRPL37Q9BZE1 423 aaKnown RBP10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 TMEM45AQ9NWC5 275 aa10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 MYEF2Q9P2K5 600 aaKnown RBP10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 USP22Q9UPT9 525 aa10.23□□□□□ -0.77
SPTLC1P3-201ENST00000403408 A0A087WUV0 522 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 A0A0G2JK05 382 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 EXOC1LA0A1B0GW35 172 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 LIPT2A6NK58 231 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ANKRD28O15084 1053 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 PLIN3O60664 434 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 STX11O75558 287 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 RP2O75695 350 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 UBA52P62987 128 aaKnown RBP10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 CEACAM7Q14002 265 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 TUSC1Q2TAM9 212 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 SPDYE7PQ495Y7 208 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 MIDNQ504T8 468 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 OTUD3Q5T2D3 398 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 FAHD2BQ6P2I3 314 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 TREML4Q6UXN2 200 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 R3HCC1LQ7Z5L2 792 aaKnown RBP10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 C17orf53Q8N3J3 647 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 POMGNT2Q8NAT1 580 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 MAGEE2Q8TD90 523 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 RAB8BQ92930 207 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 FAHD2AQ96GK7 314 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 C1orf50Q9BV19 199 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 GATA5Q9BWX5 397 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 NOX3Q9HBY0 568 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 OXSMQ9NWU1 459 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 PCDHB14Q9Y5E9 798 aa10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 SPIN1Q9Y657 262 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1P3-201ENST00000403408 OR6C65A6NJZ3 312 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 AQP7P3A6NL99 342 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 PIP5K1BO14986 540 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ZNF208O43345 1280 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 EIF1BO60739 113 aaKnown RBP10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 FSHBP01225 129 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 CHRNGP07510 517 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 KRT16P08779 473 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 OR12D1P0DN82 309 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 SAGP10523 405 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 CBR1P16152 277 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 CREB1P16220 341 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 PCMT1P22061 227 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 TACR3P29371 465 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ARRB2P32121 409 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 HPCAL1P37235 193 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ALDH3B1P43353 468 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 GPR6P46095 362 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ETF1P62495 437 aaKnown RBP10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 MAD2L1BPQ15013 274 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 OR7A5Q15622 319 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 KRT80Q6KB66 452 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 C8orf74Q6P047 294 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 CREB3L2Q70SY1 520 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 FAM169BQ8N8A8 192 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ACMSDQ8TDX5 336 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 C22orf15Q8WYQ4 148 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 C1orf147Q96MC9 270 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ZNF75AQ96N20 296 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 KCNS3Q9BQ31 491 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 NAA11Q9BSU3 229 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 OR51I1Q9H343 314 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 DYNLRB1Q9NP97 96 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 EXOSC3Q9NQT5 275 aaKnown RBP10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ZNF275Q9NSD4 429 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 OPN4Q9UHM6 478 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 PCDHGB4Q9UN71 923 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 TMED5Q9Y3A6 229 aa10.21□□□□□ -0.77
SPTLC1P3-201ENST00000403408 DNAH3Q8TD57 4116 aa10.21□□□□□ -0.78
SPTLC1P3-201ENST00000403408 H3BQF6 201 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SCN2BO60939 215 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PEX11AO75192 247 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 DEAF1O75398 565 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ZNF432O94892 652 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PNPP00491 289 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 HKR1P10072 659 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 NEFHP12036 1026 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SOAT1P35610 550 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 LIMS1P48059 325 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 UBE2NP61088 152 aaKnown RBP10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 KCNJ10P78508 379 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ARF1P84077 181 aaKnown RBP10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 POU3F1Q03052 451 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 BNIP2Q12982 314 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SNTB2Q13425 540 aaKnown RBP10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 XKR7Q5GH72 579 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 CFAP157Q5JU67 520 aa10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SHQ1Q6PI26 577 aaKnown RBP10.2□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SHISA2Q6UWI4 295 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms