RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 PYCARD-AS1I3L0S3 204 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 CDC123O75794 336 aaPredicted RBP19.26■□□□□ 0.67
CTCF-202ENST00000401394 RCBTB2O95199 551 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 VSIG10L2P0DP72 767 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 NID1P14543 1247 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 HSD17B2P37059 387 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 NHLRC3Q5JS37 347 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 TMEM31Q5JXX7 168 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 SEZ6L2Q6UXD5 910 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 KCTD20Q7Z5Y7 419 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 C1orf216Q8TAB5 229 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 GINS4Q9BRT9 223 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 ZNF350Q9GZX5 532 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 TBX21Q9UL17 535 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 ARHGEF17Q96PE2 2063 aaPredicted RBP19.26■□□□□ 0.67
CTCF-202ENST00000401394 OR6C68A6NDL8 312 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 H7C1C5 153 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 HCRTR1O43613 425 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 RASGRP1O95267 797 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 PGDP52209 483 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 LCN6P62502 163 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 PRAMEF8Q5VWM4 474 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 PRAMEF7Q5VXH5 474 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 ZNF619Q8N2I2 560 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 MEIOBQ8N635 442 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 ST8SIA4Q92187 359 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 DVL3Q92997 716 aaPredicted RBP19.26■□□□□ 0.67
CTCF-202ENST00000401394 Q96M85 177 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 FGF22Q9HCT0 170 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 NPDC1Q9NQX5 325 aaPredicted RBP19.26■□□□□ 0.67
CTCF-202ENST00000401394 OR5V1Q9UGF6 321 aa19.26■□□□□ 0.67
CTCF-202ENST00000401394 FXYD6-FXYD2A0A087WZ82 144 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 PLSCR5A0PG75 271 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 DUXAA6NLW8 204 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 ERVK-25P63136 954 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 FGD2Q7Z6J4 655 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 SLC35F2Q8IXU6 374 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 CDK20Q8IZL9 346 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 CHST6Q9GZX3 395 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 FXYD6Q9H0Q3 95 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 CACYBPQ9HB71 228 aaKnown RBP19.25■□□□□ 0.67
CTCF-202ENST00000401394 KLHDC2Q9Y2U9 406 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 EML5Q05BV3 1969 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 hCG_1807616A0A1W2PRN6 198 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 STX11O75558 287 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 PPM1BO75688 479 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 ADH1CP00326 375 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 MAS1P04201 325 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 PPM1AP35813 382 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 RPL4P36578 427 aaKnown RBP19.25■□□□□ 0.67
CTCF-202ENST00000401394 C2orf27AQ580R0 203 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 OR51A4Q8NGJ6 313 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 ZNF296Q8WUU4 475 aaPredicted RBP19.25■□□□□ 0.67
CTCF-202ENST00000401394 LCN9Q8WX39 176 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 PATE1Q8WXA2 126 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 MOAP1Q96BY2 351 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 HSPA12BQ96MM6 686 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 NRIP3Q9NQ35 241 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 NCDNQ9UBB6 729 aa19.25■□□□□ 0.67
CTCF-202ENST00000401394 ANXA2P2A6NMY6 339 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 IFITM5A6NNB3 132 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 NMBP08949 121 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 OR8G3PP0DMU2 310 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 UGT2B7P16662 529 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 ADRA2CP18825 462 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 DPP4P27487 766 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 VASPP50552 380 aaPredicted RBP19.24■□□□□ 0.67
CTCF-202ENST00000401394 P2RX1P51575 399 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 SEC13P55735 322 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 PITPNAQ00169 270 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 CEBPEQ15744 281 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 FAM78AQ5JUQ0 283 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 SLC22A10Q63ZE4 541 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 OR7E24Q6IFN5 339 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 ZNF761Q86XN6 746 aaPredicted RBP19.24■□□□□ 0.67
CTCF-202ENST00000401394 RAB42Q8N4Z0 105 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 GATSQ8NAP1 163 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 MFSD9Q8NBP5 474 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 TTLQ8NG68 377 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 ZDHHC1Q8WTX9 485 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 TOE1Q96GM8 510 aaKnown RBP19.24■□□□□ 0.67
CTCF-202ENST00000401394 CD93Q9NPY3 652 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 NPTNQ9Y639 398 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 TBC1D3EA0A087X179 549 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 TBC1D3KA0A087X1G2 549 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 TBC1D3FA6NER0 549 aaPredicted RBP19.24■□□□□ 0.67
CTCF-202ENST00000401394 FKTNO75072 461 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 IGKV1D-16P01601 117 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 TNFRSF17Q02223 184 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 ALG10BQ5I7T1 473 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 TBC1D3GQ6DHY5 549 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 MAMSTRQ6ZN01 415 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 TMPRSS11FQ6ZWK6 438 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 TEX101Q9BY14 249 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 ACSL5Q9ULC5 683 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 DTX4Q9Y2E6 619 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 RWDD3Q9Y3V2 267 aa19.24■□□□□ 0.67
CTCF-202ENST00000401394 SLC22A23A1A5C7 686 aa19.23■□□□□ 0.67
CTCF-202ENST00000401394 TSPAN9O75954 239 aa19.23■□□□□ 0.67
CTCF-202ENST00000401394 RLN1P04808 185 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms