RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TTC28Q96AY4 2481 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 EEF1E1O43324 174 aaKnown RBP12.88□□□□□ -0.35
SCAF4-202ENST00000399804 OR8G3PP0DMU2 310 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 BMP4P12644 408 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 GABRA5P31644 462 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 IDUAP35475 653 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.352e-6■■■□□ 15.4
SCAF4-202ENST00000399804 LANCL3Q6ZV70 420 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 BTLAQ7Z6A9 289 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 PHC2Q8IXK0 858 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 RNF121Q9H920 327 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 CMC2Q9NRP2 79 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 A0A1B0GVC2 190 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 A6NIN4 97 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 IL1AP01583 271 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 MAKP20794 623 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 VASNQ6EMK4 673 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 DPY19L4Q7Z388 723 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 SFXN2Q96NB2 322 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 SARGQ9BW04 601 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 VN1R1Q9GZP7 353 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 KDM4EB2RXH2 506 aaPredicted RBP12.87□□□□□ -0.35
SCAF4-202ENST00000399804 HRKO00198 91 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 EIF4E2O60573 245 aaKnown RBP12.87□□□□□ -0.35
SCAF4-202ENST00000399804 FBXO45P0C2W1 286 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 RBMS1P29558 406 aaKnown RBP12.87□□□□□ -0.35
SCAF4-202ENST00000399804 ADH7P40394 386 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 DNAH12Q6ZR08 3092 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 MISPQ8IVT2 679 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 ACOT12Q8WYK0 555 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 THRSPQ92748 146 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 GHSRQ92847 366 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 NAA11Q9BSU3 229 aaPredicted RBP12.87□□□□□ -0.35
SCAF4-202ENST00000399804 ARRDC1-AS1Q9H2J1 176 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 SLC25A19Q9HC21 320 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 SBK2P0C263 348 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 OR2T7P0C7T2 308 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 HIST1H1CP16403 213 aaKnown RBP12.87□□□□□ -0.35
SCAF4-202ENST00000399804 ZNF28P17035 718 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 DAP3P51398 398 aaKnown RBP12.87□□□□□ -0.35
SCAF4-202ENST00000399804 AQP6Q13520 282 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 PRTGQ2VWP7 1150 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 TMEM53Q6P2H8 277 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 CNIH2Q6PI25 160 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 SLC35D2Q76EJ3 337 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 OR2T27Q8NH04 317 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 C20orf141Q9NUB4 165 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 CCDC59Q9P031 241 aaKnown RBP12.87□□□□□ -0.35
SCAF4-202ENST00000399804 PILRAQ9UKJ1 303 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 A6NIZ1 184 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 A8MVM7 634 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 CENPBD1B2RD01 187 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 PHYHO14832 338 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 CLEC2LP0C7M8 214 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 RAP1BP61224 184 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 RAP1AP62834 184 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 COL28A1Q2UY09 1125 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 HES5Q5TA89 166 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 SLC7A5P1Q8MH63 180 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 MORN4Q8NDC4 146 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 NLGN4YQ8NFZ3 816 aaPredicted RBP12.87□□□□□ -0.35
SCAF4-202ENST00000399804 ANKRD10Q9NXR5 420 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 IL20Q9NYY1 176 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 B4GALT7Q9UBV7 327 aa12.87□□□□□ -0.35
SCAF4-202ENST00000399804 YARS2Q9Y2Z4 477 aaKnown RBP12.87□□□□□ -0.35
SCAF4-202ENST00000399804 A6NL46 340 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 NTN1O95631 604 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 RASGEF1BQ0VAM2 473 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 EIF2B1Q14232 305 aaKnown RBP12.86□□□□□ -0.35
SCAF4-202ENST00000399804 FAM69AQ5T7M9 428 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 PPP1R14AQ96A00 147 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 RFT1Q96AA3 541 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 TM4SF19Q96DZ7 209 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 RBM24Q9BX46 236 aaKnown RBP12.86□□□□□ -0.35
SCAF4-202ENST00000399804 SLC25A18Q9H1K4 315 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 SMOC1Q9H4F8 434 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 ING4Q9UNL4 249 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 UPK1BO75841 260 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 NCR1O76036 304 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 F10P00742 488 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 CCNOP22674 350 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 PSG6Q00889 435 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 SRYQ05066 204 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 GLT8D1Q68CQ7 371 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 GRINAQ7Z429 371 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 PARP16Q8N5Y8 322 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 FRMD6Q96NE9 622 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 OR11A1Q9GZK7 315 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 B3GAT2Q9NPZ5 323 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 PRDM6Q9NQX0 595 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 KCND3Q9UK17 655 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 TMEM129A0AVI4 362 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 SURF4O15260 269 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 FOXS1O43638 330 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 GPX5O75715 221 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 GSTT2BP0CG30 244 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 P2RX1P51575 399 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 NKX2-5P52952 324 aaPredicted RBP12.86□□□□□ -0.35
SCAF4-202ENST00000399804 PRKCDQ05655 676 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 CHAF1BQ13112 559 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms