RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TAPBPLQ9BX59 468 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 RSPO3Q9BXY4 272 aaPredicted RBP13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 EVA1AQ9H8M9 152 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 MRGBPQ9NV56 204 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 PDLIM1O00151 329 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 SERPINB7O75635 380 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 AKR7A3O95154 331 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 AHSA1O95433 338 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 IGHV3-9P01782 118 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 CD3EP07766 207 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 PAX1P15863 534 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 P2RY4P51582 365 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 RBBP4Q09028 425 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 STK11Q15831 433 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 OR7E24Q6IFN5 339 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 ALKBH2Q6NS38 261 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 C5orf46Q6UWT4 87 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 PRSS57Q6UWY2 283 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 RETREG3Q86VR2 466 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 C11orf65Q8NCR3 313 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 OR9K2Q8NGE7 335 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 MFSD8Q8NHS3 518 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 DNAJA4Q8WW22 397 aaPredicted RBP13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 GSX2Q9BZM3 304 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 TRIM2Q9C040 744 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 AMBRA1Q9C0C7 1298 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 RPS6KB2Q9UBS0 482 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 TESQ9UGI8 421 aaKnown RBP13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 ANGPT4Q9Y264 503 aa13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 NSD1Q96L73 2696 aaPredicted RBP13.11□□□□□ -0.31
SMIM11A-203ENST00000399299 PLCE1Q9P212 2302 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 CIB4A0PJX0 185 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 ELOA3DA6NLF2 546 aaPredicted RBP13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 FTCDNL1E5RQL4 147 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 TPST1O60507 370 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 TROVE2P10155 538 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 HOXC5Q00444 222 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 EGR4Q05215 589 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 BSPH1Q075Z2 132 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 FAPQ12884 760 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 ELOA3BQ3SY89 546 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 Q5PR19 223 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 C1QTNF12Q5T7M4 302 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 FAM91A1Q658Y4 838 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 NET1Q7Z628 596 aaPredicted RBP13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 COMTD1Q86VU5 262 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 LSRQ86X29 649 aaPredicted RBP13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 PTOV1Q86YD1 416 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 P3H2Q8IVL5 708 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 ZIC4Q8N9L1 334 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 C1orf162Q8NEQ5 155 aaPredicted RBP13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 ELOA3Q8NG57 546 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 TMEM171Q8WVE6 324 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 AKAP1Q92667 903 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 MUS81Q96NY9 551 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 TMEM120AQ9BXJ8 343 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 CXorf56Q9H5V9 222 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 ADPRHL2Q9NX46 363 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 RASD1Q9Y272 281 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 ZFHX3Q15911 3703 aa13.1□□□□□ -0.31
SMIM11A-203ENST00000399299 A0A1B0GWA3 101 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 DPRXA6NFQ7 191 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 CCT8L1PA6NM43 557 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 RAD51DO75771 328 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 MFN2O95140 757 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 ITGA5P08648 1049 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 PNMTP11086 282 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 HTR2AP28223 471 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 PCBP3P57721 371 aaKnown RBP13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 NCALDP61601 193 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 NFYCQ13952 458 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 GABRA6Q16445 453 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 CYP51A1Q16850 503 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 GLIPR1L2Q4G1C9 344 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 TSPO2Q5TGU0 170 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 TMEM225Q6GV28 225 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 ARMC8Q8IUR7 673 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 SLC30A8Q8IWU4 369 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 C17orf78Q8N4C9 275 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 POMGNT2Q8NAT1 580 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 OR52E4Q8NGH9 312 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 LILRB1Q8NHL6 650 aaPredicted RBP13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 FBXW5Q969U6 566 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 ZNF385AQ96PM9 386 aaKnown RBP13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 PTDSS2Q9BVG9 487 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 SLCO5A1Q9H2Y9 848 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 KAT8Q9H7Z6 458 aaKnown RBP13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 SLC7A10Q9NS82 523 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 ZNF701Q9NV72 531 aaPredicted RBP13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 ZNF446Q9NWS9 450 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 NPAP1Q9NZP6 1156 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 UPB1Q9UBR1 384 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 SLC25A15Q9Y619 301 aa13.09□□□□□ -0.31
SMIM11A-203ENST00000399299 ZANQ9Y493 2812 aa13.08□□□□□ -0.31
SMIM11A-203ENST00000399299 USF3Q68DE3 2245 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 CLOCKO15516 846 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 OR2T1O43869 369 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 MPGP29372 298 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 AQP1P29972 269 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 PTH2RP49190 550 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms