RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CNN2Q99439 309 aaKnown RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 ZNF559Q9BR84 538 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 ZNF416Q9BWM5 594 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 HAO2Q9NYQ3 351 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 MED11Q9P086 117 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 OR5V1Q9UGF6 321 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 KCNE5Q9UJ90 142 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 A0A0C4DFX4 3053 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 ANKRD61A6NGH8 418 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 NARSO43776 548 aaKnown RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 SDC3O75056 442 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 CBX7O95931 251 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 RLN1P04808 185 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 TMIGD3P0DMS9 266 aaPredicted RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 RAB28P51157 221 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 ACTA2P62736 377 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 ACTG2P63267 376 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 ID2Q02363 134 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 CBFBQ13951 182 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 KRT33BQ14525 404 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 CSRP2Q16527 193 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 DCAF12L2Q5VW00 463 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 RPL22L1Q6P5R6 122 aaKnown RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 HSD17B13Q7Z5P4 300 aaPredicted RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 LRRC25Q8N386 305 aaPredicted RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 KCT2Q8NC54 265 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 SLC2A12Q8TD20 617 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 OTUB2Q96DC9 234 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 GPR174Q9BXC1 333 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 SNRPGP15A8MWD9 76 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 D6RAR5 112 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 IMPA2O14732 288 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 SCAMP1O15126 338 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 SELENOFO60613 162 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 PTP4A3O75365 173 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 CDK3Q00526 305 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 POU4F2Q12837 409 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 STK11Q15831 433 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 ZNF660Q6AZW8 331 aaPredicted RBP12.85□□□□□ -0.35
APOB-202ENST00000399256 PWWP2BQ6NUJ5 590 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 FIGNL1Q6PIW4 674 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 LINC00518Q8N0U6 118 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 ZNRF4Q8WWF5 429 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 EVA1AQ9H8M9 152 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 ADAP2Q9NPF8 381 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 KCNK6Q9Y257 313 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 TBC1D3KA0A087X1G2 549 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 UBE2QL1A1L167 161 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 TBC1D3BA6NDS4 549 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 TBC1D3FA6NER0 549 aaPredicted RBP12.85□□□□□ -0.35
APOB-202ENST00000399256 OR52A4PA6NMU1 304 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 GNB5O14775 395 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 IL5P05113 134 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 HIST1H1CP16403 213 aaKnown RBP12.85□□□□□ -0.35
APOB-202ENST00000399256 CAPZA2P47755 286 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 DLX5P56178 289 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 DEFA5Q01523 94 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 CEBPEQ15744 281 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 TRMT12Q53H54 448 aaKnown RBP12.85□□□□□ -0.35
APOB-202ENST00000399256 TBC1D3GQ6DHY5 549 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 ZNF613Q6PF04 617 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 MTSS1LQ765P7 747 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 ERN2Q76MJ5 926 aaKnown RBP12.85□□□□□ -0.35
APOB-202ENST00000399256 CDH26Q8IXH8 852 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 CMTM3Q96MX0 182 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 SLC38A3Q99624 504 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 SAV1Q9H4B6 383 aaPredicted RBP12.85□□□□□ -0.35
APOB-202ENST00000399256 PCDHB16Q9NRJ7 776 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 C2orf42Q9NWW7 574 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 SPHK1Q9NYA1 384 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 OR1A2Q9Y585 309 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 V9GY05 133 aa12.85□□□□□ -0.35
APOB-202ENST00000399256 SNRNP200O75643 2136 aaKnown RBP12.84□□□□□ -0.35
APOB-202ENST00000399256 FAM74A7A6NL05 159 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 DNASE2O00115 360 aaPredicted RBP12.84□□□□□ -0.35
APOB-202ENST00000399256 LILRB3O75022 631 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 MOSPD3O75425 235 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 IFNGP01579 166 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 RLN2P04090 185 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 TAS2R20P59543 309 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 ERVFC1P60507 584 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 MAT1AQ00266 395 aaKnown RBP12.84□□□□□ -0.35
APOB-202ENST00000399256 ZNF169Q14929 603 aaPredicted RBP12.84□□□□□ -0.35
APOB-202ENST00000399256 ZNF77Q15935 545 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 FAM74A3Q4VXF1 159 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 ZC3H14Q6PJT7 736 aaKnown RBP12.84□□□□□ -0.35
APOB-202ENST00000399256 NAXDQ8IW45 347 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 ZNF619Q8N2I2 560 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 DNAAF1Q8NEP3 725 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 OR8D1Q8WZ84 308 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 NPAS1Q99742 590 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 TSPAN10Q9H1Z9 355 aaPredicted RBP12.84□□□□□ -0.35
APOB-202ENST00000399256 NCDNQ9UBB6 729 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 PRRT4C9JH25 899 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 F5H5P2 479 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 THBS1P07996 1170 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 OR2T7P0C7T2 308 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 CALCRP30988 508 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 PLA2G7Q13093 441 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms