RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 BRIX1Q8TDN6 353 aaKnown RBP13.8□□□□□ -0.2
COL25A1-201ENST00000399126 YIPF6Q96EC8 236 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 Q96MT0 163 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 SLC38A2Q96QD8 506 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 MED20Q9H944 212 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 CNOT2Q9NZN8 540 aaKnown RBP13.8□□□□□ -0.2
COL25A1-201ENST00000399126 TMEM5Q9Y2B1 443 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 ZNF292O60281 2723 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 B4DXG7 233 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 BHLHE40O14503 412 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 SHOXO15266 292 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 MRPS14O60783 128 aaKnown RBP13.8□□□□□ -0.2
COL25A1-201ENST00000399126 NOL3O60936 208 aaKnown RBP13.8□□□□□ -0.2
COL25A1-201ENST00000399126 KLF7O75840 302 aaPredicted RBP13.8□□□□□ -0.2
COL25A1-201ENST00000399126 CCNA2P20248 432 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 TGFBR2P37173 567 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 TMBIM6P55061 237 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 GALK2Q01415 458 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 SPEM2Q0P670 501 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 CTF1Q16619 201 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 AARDQ4LEZ3 155 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 OAFQ86UD1 273 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 CDK20Q8IZL9 346 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 WDR36Q8NI36 951 aaKnown RBP13.8□□□□□ -0.2
COL25A1-201ENST00000399126 OTULINQ96BN8 352 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 NUDT16L1Q9BRJ7 211 aaKnown RBP13.8□□□□□ -0.2
COL25A1-201ENST00000399126 TBL1XR1Q9BZK7 514 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 MCCC2Q9HCC0 563 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 HINT3Q9NQE9 182 aaKnown RBP13.8□□□□□ -0.2
COL25A1-201ENST00000399126 ENPP5Q9UJA9 477 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 PTRH2Q9Y3E5 179 aaKnown RBP13.8□□□□□ -0.2
COL25A1-201ENST00000399126 NPFFR2Q9Y5X5 522 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 MED12Q93074 2177 aa13.8□□□□□ -0.2
COL25A1-201ENST00000399126 CNOT1A5YKK6 2376 aaKnown RBP13.8□□□□□ -0.2
COL25A1-201ENST00000399126 ALG1L2C9J202 215 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 ADAM10O14672 748 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 PTP4A3O75365 173 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 KLK3P07288 261 aaPredicted RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 HSMCR30P0CW71 290 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 ZNF182P17025 639 aaPredicted RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 HTR3AP46098 478 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 PNLIPRP2P54317 469 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 SLC26A5P58743 744 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 ZSWIM7Q19AV6 140 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 SLC6A19Q695T7 634 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 BICRALQ6AI39 1079 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 CLDN22Q8N7P3 220 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 OR10Z1Q8NGY1 313 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 GRPEL2Q8TAA5 225 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 ZNF845Q96IR2 970 aaPredicted RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 CMKLR1Q99788 373 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 EDEM2Q9BV94 578 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 IFT27Q9BW83 186 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 HCAR1Q9BXC0 346 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 EVA1AQ9H8M9 152 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 RPL36Q9Y3U8 105 aaKnown RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 LOXL2Q9Y4K0 774 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 RIF1Q5UIP0 2472 aaKnown RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 ZC3H12DA2A288 527 aaKnown RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 FADS1O60427 444 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 CCKBRP32239 447 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 RBM34P42696 430 aaKnown RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 GAS1P54826 345 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 INSM1Q01101 510 aaPredicted RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 TIGD6Q17RP2 521 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 WBP2NLQ6ICG8 309 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 ATG4DQ86TL0 474 aaPredicted RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 C17orf47Q8NEP4 570 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 DNAJA4Q8WW22 397 aaPredicted RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 PPIEQ9UNP9 301 aaKnown RBP13.79□□□□□ -0.2
COL25A1-201ENST00000399126 CPAMD8Q8IZJ3 1885 aa13.79□□□□□ -0.2
COL25A1-201ENST00000399126 A0A1W2PNU3 283 aaPredicted RBP13.78□□□□□ -0.2
COL25A1-201ENST00000399126 CLDN25C9JDP6 229 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 SOCS6O14544 535 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 CLPXO76031 633 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 PPP1R3DO95685 299 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 PIPP12273 146 aaPredicted RBP13.78□□□□□ -0.2
COL25A1-201ENST00000399126 BMP7P18075 431 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 ITPKBP27987 946 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 AP2S1P53680 142 aaPredicted RBP13.78□□□□□ -0.2
COL25A1-201ENST00000399126 MED22Q15528 200 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 SLC25A30Q5SVS4 291 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 CLEC2AQ6UVW9 174 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 CPOQ8IVL8 374 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 FAM109AQ8N4B1 249 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 OR52I1Q8NGK6 324 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 ZNF563Q8TA94 476 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 RAB2BQ8WUD1 216 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 SGK3Q96BR1 496 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 LGALS12Q96DT0 336 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 TM9SF2Q99805 663 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 CDCA4Q9BXL8 241 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 KCNN2Q9H2S1 579 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 GALNT9Q9HCQ5 603 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 EXOSC3Q9NQT5 275 aaKnown RBP13.78□□□□□ -0.2
COL25A1-201ENST00000399126 GPN3Q9UHW5 284 aaPredicted RBP13.78□□□□□ -0.2
COL25A1-201ENST00000399126 ICAM5Q9UMF0 924 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 HRH3Q9Y5N1 445 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 NADKO95544 446 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms