RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 VEZF1Q14119 521 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SLC17A1Q14916 467 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 FBXW10Q5XX13 1052 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 C6orf89Q6UWU4 347 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 RANBP3LQ86VV4 465 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TSPYL5Q86VY4 417 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ZNF100Q8IYN0 542 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 STK35Q8TDR2 534 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SLC38A4Q969I6 547 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 MCHR1Q99705 422 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NAA11Q9BSU3 229 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TAPBPLQ9BX59 468 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 LIME1Q9H400 295 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TMEM27Q9HBJ8 222 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 EMC3Q9P0I2 261 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SEC14L4Q9UDX3 406 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NOSIPQ9Y314 301 aaKnown RBP12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 OTOGQ6ZRI0 2925 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 AKAP9Q99996 3911 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 A0A1W2PPR1 153 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 AQP7P3A6NL99 342 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CPSF4LA6NMK7 179 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 FAM220BPB1ANY3 271 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 FTCDNL1E5RQL4 147 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NME4O00746 187 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 AHSA1O95433 338 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 THBDP07204 575 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PSMB1P20618 241 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 P2RY4P51582 365 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SLC7A2P52569 658 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ENTPD8Q5MY95 495 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 FAM91A1Q658Y4 838 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 C8orf82Q6P1X6 216 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ERICH5Q6P6B1 374 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 Q6ZT83 130 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 GPAT4Q86UL3 456 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CDC20BQ86Y33 519 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TAAR8Q969N4 342 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CMTM5Q96DZ9 223 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SLC47A1Q96FL8 570 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ACTR6Q9GZN1 396 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 C12orf10Q9HB07 376 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SH3GLB1Q9Y371 365 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 FLVCR1Q9Y5Y0 555 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CCDC168Q8NDH2 2452 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PRR14LQ5THK1 2151 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 A0A087WUJ7 227 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ELOVL7A1L3X0 281 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 GPR171O14626 319 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SHOX2O60902 331 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 LYZL6O75951 148 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 HRGP04196 525 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 THY1P04216 161 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PNMTP11086 282 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CBLP22681 906 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 LIPEQ05469 1076 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 LRRC23Q53EV4 343 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SFRP5Q5T4F7 317 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TMEM225Q6GV28 225 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ALKBH2Q6NS38 261 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 MICU2Q8IYU8 434 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 KDM8Q8N371 416 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ZIC4Q8N9L1 334 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 MFSD8Q8NHS3 518 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ADAMTS16Q8TE57 1224 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 S100PBPQ96BU1 408 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ZNF385AQ96PM9 386 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 HOPXQ9BPY8 73 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 FANCFQ9NPI8 374 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ZNF226Q9NYT6 803 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SELENONQ9NZV5 590 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 GPR52Q9Y2T5 361 aa12.47□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ANKRD17O75179 2603 aaKnown RBP12.46□□□□□ -0.41
HLA-DQB1-202ENST00000399079 MYO9AB2RTY4 2548 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 DEFB108AA8MXU0 73 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FMO6PO60774 539 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 MRPL33O75394 65 aaKnown RBP12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 KDELR2P33947 212 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 OR1E2P47887 323 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ITGADQ13349 1161 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FAM69AQ5T7M9 428 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CASP12Q6UXS9 341 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 HACD2Q6Y1H2 254 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 WDR88Q6ZMY6 472 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ARPINQ7Z6K5 226 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CDH24Q86UP0 819 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 UBE2J2Q8N2K1 259 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 OR9K2Q8NGE7 335 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 RASSF5Q8WWW0 418 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PROX1Q92786 737 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 APH1AQ96BI3 265 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 EVA1AQ9H8M9 152 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ARL2BPQ9Y2Y0 163 aa12.46□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TRAV36DV7A0A075B6V5 113 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 LRRN3E7EW58 273 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CRYGSP22914 178 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 IGHV1-2P23083 117 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PRDX6P30041 224 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FOXG1P55316 489 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 P2RY6Q15077 328 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms