RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 SEZ6L2Q6UXD5 910 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 KRT73Q86Y46 540 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 CKAP2Q8WWK9 683 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 STON2Q8WXE9 905 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 SLC35B4Q969S0 331 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 Q96MF0 132 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 BDH2Q9BUT1 245 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 REPIN1Q9BWE0 567 aaKnown RBP11.82□□□□□ -0.52
VCX3A-202ENST00000398729 SF3B5Q9BWJ5 86 aaKnown RBP11.82□□□□□ -0.52
VCX3A-202ENST00000398729 SLC52A3Q9NQ40 469 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 VAPAQ9P0L0 249 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 SLAMF8Q9P0V8 285 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.82□□□□□ -0.52
VCX3A-202ENST00000398729 CORO2BQ9UQ03 480 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 GMEB1Q9Y692 573 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 USF3Q68DE3 2245 aa11.82□□□□□ -0.52
VCX3A-202ENST00000398729 A0A1W2PP18 115 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 AQP7P3A6NL99 342 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 EVPLLA8MZ36 301 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 SMAD7O15105 426 aaKnown RBP11.81□□□□□ -0.52
VCX3A-202ENST00000398729 AKR7A3O95154 331 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 PAX1P15863 534 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 H2AFXP16104 143 aaPredicted RBP11.81□□□□□ -0.52
VCX3A-202ENST00000398729 PRKAR1BP31321 381 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 RPS4XP62701 263 aaKnown RBP11.81□□□□□ -0.52
VCX3A-202ENST00000398729 CDK6Q00534 326 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 C1orf140Q5VVS0 124 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 TMEM225Q6GV28 225 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 REEP3Q6NUK4 255 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 ATG4DQ86TL0 474 aaPredicted RBP11.81□□□□□ -0.52
VCX3A-202ENST00000398729 LSRQ86X29 649 aaPredicted RBP11.81□□□□□ -0.52
VCX3A-202ENST00000398729 MSRB3Q8IXL7 192 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 TMEM99Q8N816 258 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 KBTBD8Q8NFY9 601 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 OR52N5Q8NH56 324 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 LILRB1Q8NHL6 650 aaPredicted RBP11.81□□□□□ -0.52
VCX3A-202ENST00000398729 NFKBIDQ8NI38 313 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 TMEM45BQ96B21 275 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 SPATA5L1Q9BVQ7 753 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 ZNF701Q9NV72 531 aaPredicted RBP11.81□□□□□ -0.52
VCX3A-202ENST00000398729 ADPRHL2Q9NX46 363 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 TRIM33Q9UPN9 1127 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 LAMP3Q9UQV4 416 aa11.81□□□□□ -0.52
VCX3A-202ENST00000398729 TRBV5-3A0A0A0MS03 114 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 TRIM64A6NGJ6 449 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 TRIM64BA6NI03 449 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 FRS3O43559 492 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 AHSA1O95433 338 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 GPX2P18283 190 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 ATP5J2P56134 94 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 TGFBR3Q03167 851 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 GABRA6Q16445 453 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 ZNF672Q499Z4 452 aaPredicted RBP11.8□□□□□ -0.52
VCX3A-202ENST00000398729 TMEM108Q6UXF1 575 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 AAED1Q7RTV5 226 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 GPAT4Q86UL3 456 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 OR9K2Q8NGE7 335 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 OR52E4Q8NGH9 312 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 STK35Q8TDR2 534 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 SMAP2Q8WU79 429 aaPredicted RBP11.8□□□□□ -0.52
VCX3A-202ENST00000398729 NEUROG1Q92886 237 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 C3orf49Q96BT1 292 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 THOC1Q96FV9 657 aaKnown RBP11.8□□□□□ -0.52
VCX3A-202ENST00000398729 MUS81Q96NY9 551 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 TRIM2Q9C040 744 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 PIF1Q9H611 641 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 TMEM38AQ9H6F2 299 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 SLC7A10Q9NS82 523 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 NPAP1Q9NZP6 1156 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 RPS6KB2Q9UBS0 482 aa11.8□□□□□ -0.52
VCX3A-202ENST00000398729 ELOA3DA6NLF2 546 aaPredicted RBP11.79□□□□□ -0.52
VCX3A-202ENST00000398729 TMEM229AB2RXF0 380 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 PDLIM1O00151 329 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 ABCD4O14678 606 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 NPIPB7O75200 414 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 VAMP5O95183 116 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 ITGA5P08648 1049 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 DANCRP0C864 163 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 SLC6A2P23975 617 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 FOXG1P55316 489 aaPredicted RBP11.79□□□□□ -0.52
VCX3A-202ENST00000398729 HOXC5Q00444 222 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 SCARB2Q14108 478 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 ELOA3BQ3SY89 546 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 TSPO2Q5TGU0 170 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 DHRS4L2Q6PKH6 230 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 KLHL17Q6TDP4 642 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 C10orf111Q8N326 155 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 ZIC4Q8N9L1 334 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 C1orf162Q8NEQ5 155 aaPredicted RBP11.79□□□□□ -0.52
VCX3A-202ENST00000398729 ELOA3Q8NG57 546 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 MFSD8Q8NHS3 518 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 GTPBP3Q969Y2 492 aaKnown RBP11.79□□□□□ -0.52
VCX3A-202ENST00000398729 TRMT61AQ96FX7 289 aaKnown RBP11.79□□□□□ -0.52
VCX3A-202ENST00000398729 RADILQ96JH8 1075 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 ZNF385AQ96PM9 386 aaKnown RBP11.79□□□□□ -0.52
VCX3A-202ENST00000398729 ZNF607Q96SK3 696 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 SIKE1Q9BRV8 207 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 SLCO5A1Q9H2Y9 848 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 C12orf10Q9HB07 376 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 LEF1Q9UJU2 399 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms