RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 RRP15Q9Y3B9 282 aaKnown RBP1.91□□□□□ -2.1
CD47-203ENST00000398258 NPTNQ9Y639 398 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 TCRBV9S1A1TA0A576 114 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 CCDC182A6NF36 153 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 CCDC169A6NNP5 214 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 UBXN8O00124 270 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 FOXE1O00358 373 aaPredicted RBP1.9□□□□□ -2.11
CD47-203ENST00000398258 MED7O43513 233 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 UGT1A9O60656 530 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 BBOX1O75936 387 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 ATP5LO75964 103 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 SLC2A3P11169 496 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 CCDC130P13994 396 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 ETS2P15036 469 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 CD1CP29017 333 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 IL12AP29459 219 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 PBLDP30039 288 aaPredicted RBP1.9□□□□□ -2.11
CD47-203ENST00000398258 HTR1FP30939 366 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 SSR1P43307 286 aaKnown RBP1.9□□□□□ -2.11
CD47-203ENST00000398258 CRYBB2P43320 205 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 OR3A4PP47883 348 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 PKNOX1P55347 436 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 DLX1P56177 255 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 ATP5IP56385 69 aaPredicted RBP1.9□□□□□ -2.11
CD47-203ENST00000398258 ACTR3P61158 418 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 NDPQ00604 133 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 BST1Q10588 318 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 GK3PQ14409 553 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 GNMTQ14749 295 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 OXA1LQ15070 435 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 IL17AQ16552 155 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 C1orf100Q5SVJ3 147 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 C1orf146Q5VVC0 180 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 OR2A2Q6IF42 318 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 ENPP6Q6UWR7 440 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 SLC25A48Q6ZT89 311 aaKnown RBP1.9□□□□□ -2.11
CD47-203ENST00000398258 PGAP1Q75T13 922 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 TMEM179BQ7Z7N9 219 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 FTMTQ8N4E7 242 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 TMEM252Q8N6L7 170 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 ALLCQ8N6M5 410 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 OR4K14Q8NGD5 310 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 OR52H1Q8NGJ2 320 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 OR52I1Q8NGK6 324 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 OR1L4Q8NGR5 311 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 ANKRD49Q8WVL7 239 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 RAPGEF5Q92565 580 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 FGF14Q92915 247 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 TUBGCP3Q96CW5 907 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 CLCC1Q96S66 551 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 MAPKAP1Q9BPZ7 522 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 EBF4Q9BQW3 602 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 TRIM62Q9BVG3 475 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 ROPN1BQ9BZX4 212 aaPredicted RBP1.9□□□□□ -2.11
CD47-203ENST00000398258 OR51J1Q9H342 316 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 AZI2Q9H6S1 392 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 PTGES2Q9H7Z7 377 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 METTL7AQ9H8H3 244 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 POLE4Q9NR33 117 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 PEX16Q9Y5Y5 336 aa1.9□□□□□ -2.11
CD47-203ENST00000398258 TDRD6O60522 2096 aaKnown RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 THSD7BQ9C0I4 1608 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 PPIAL4EA0A075B759 164 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 A0A1B0GVL5 298 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 FAM231BA6NCW3 169 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 OR5B21A6NL26 309 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 AP3B1O00203 1094 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 HAS3O00219 553 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 MPHOSPH10O00566 681 aaKnown RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 RGS16O15492 202 aaPredicted RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 MMP23AO75900 390 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 GAPDHP04406 335 aaKnown RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 FGF1P05230 155 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 CRYGBP07316 175 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 PPIAL4FP0DN26 164 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 ATP1B2P14415 290 aaPredicted RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 TBPP20226 339 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 CMA1P23946 247 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 ANXA13P27216 316 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 SHMT2P34897 504 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 FDFT1P37268 417 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 YAP1P46937 504 aaKnown RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 GYG1P46976 350 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 KLK7P49862 253 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 KPNA2P52292 529 aaKnown RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 LYZP61626 148 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 GNB2P62879 340 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 TLE4Q04727 773 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 GPNMBQ14956 572 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 SSX2Q16385 188 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 MICBQ29980 383 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 BCL7AQ4VC05 210 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 BOLA3Q53S33 107 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 DMRTC1Q5HYR2 192 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 RFLNAQ6ZTI6 216 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 TAS2R42Q7RTR8 314 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 TGIF2LXQ8IUE1 241 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 PIANPQ8IYJ0 282 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 ZNF100Q8IYN0 542 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 OR9K2Q8NGE7 335 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms