RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SAMD12Q8N8I0 201 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZNRF4Q8WWF5 429 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GHSRQ92847 366 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ENAMQ9NRM1 1142 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 RBFOX1Q9NWB1 397 aaKnown RBP16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 WSB2Q9NYS7 404 aaPredicted RBP16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZNF224Q9NZL3 707 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CHRNA9Q9UGM1 479 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ADAM30Q9UKF2 790 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 MRPS33Q9Y291 106 aaKnown RBP16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SDK1Q7Z5N4 2213 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 A0A1W2PPC4 97 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SMLR1H3BR10 107 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 IFNGP01579 166 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 IFNA16P05015 189 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 EIF4EP06730 217 aaKnown RBP16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 INPP1P49441 399 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ATP12AP54707 1039 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TNK1Q13470 666 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZNF141Q15928 474 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZNF57Q68EA5 555 aaPredicted RBP16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SFXN4Q6P4A7 337 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SYT9Q86SS6 491 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 BCORP1Q8N888 145 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GPR27Q9NS67 375 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 BAIAP2Q9UQB8 552 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 MPDZO75970 2070 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 NPIPB9F8W1W9 429 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SLC19A2O60779 497 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PRAMEF2O60811 474 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 THBS2P35442 1172 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 RPL4P36578 427 aaKnown RBP16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SLC25A35Q3KQZ1 300 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ACSM3Q53FZ2 586 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZNF550Q7Z398 422 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ORAI3Q9BRQ5 295 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 OR10A5Q9H207 317 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 HAO2Q9NYQ3 351 aa16.82■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PCDH15Q96QU1 1955 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 FAM240BA0A1B0GVZ2 78 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CLDN4O14493 209 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 NDUFB2O95178 105 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PRKAR1AP10644 381 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 BLKP51451 505 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TATDN3Q17R31 274 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LIX1LQ8IVB5 337 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TCTE3Q8IZS6 198 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ACOT12Q8WYK0 555 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 MKKSQ9NPJ1 570 aaPredicted RBP16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LANCL1O43813 399 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SRPX2O60687 465 aaPredicted RBP16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LAMTOR1Q6IAA8 161 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TRILQ7L0X0 811 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZNF595Q8IYB9 648 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZPLD1Q8TCW7 415 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 UPRTQ96BW1 309 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SGTBQ96EQ0 304 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 NMNAT3Q96T66 252 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 KCNJ15Q99712 375 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TRAF4Q9BUZ4 470 aaPredicted RBP16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SERTAD3Q9UJW9 196 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 THADAQ6YHU6 1953 aa16.81■□□□□ 0.28
CHRFAM7A-202ENST00000397827 NDUFA2O43678 99 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 MAOBP27338 520 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GFERP55789 205 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 DMKNQ6E0U4 476 aaPredicted RBP16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LYPD4Q6UWN0 246 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LINC00518Q8N0U6 118 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 G6PC3Q9BUM1 346 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 HDHD2Q9H0R4 259 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CLEC4AQ9UMR7 237 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SERINC4A6NH21 518 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SC5DO75845 299 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 FAM157BP0CG42 384 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TFPIP10646 304 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TAS2R43P59537 309 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 RIN1Q13671 783 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 IGSF11Q5DX21 431 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 MZT2BQ6NZ67 158 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ASB18Q6ZVZ8 466 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 OR8H3Q8N146 312 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 FBXW5Q969U6 566 aa16.8■□□□□ 0.28
CHRFAM7A-202ENST00000397827 A0A087WUJ7 227 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 A0A0G2JK05 382 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SOX30O94993 753 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 IGLV3-19P01714 112 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CAPZBP47756 277 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ACTC1P68032 377 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ACTA1P68133 377 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 IGLV3-21P80748 117 aaPredicted RBP16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PXKQ7Z7A4 578 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LRRC28Q86X40 367 aaPredicted RBP16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TMEM131Q92545 1883 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CYSLTR2Q9NS75 346 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SOHLH2Q9NX45 425 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ST6GALNAC2Q9UJ37 374 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LINC00862A6NCI5 91 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 C4orf47A7E2U8 309 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 NSA2O95478 260 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms