RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 THSD4Q6ZMP0 1018 aa19.09■□□□□ 0.65
CPNE1-204ENST00000397443 UBQLNLQ8IYU4 475 aa19.09■□□□□ 0.65
CPNE1-204ENST00000397443 FAM81AQ8TBF8 368 aa19.09■□□□□ 0.65
CPNE1-204ENST00000397443 OR2B2Q9GZK3 357 aa19.09■□□□□ 0.65
CPNE1-204ENST00000397443 MCCC2Q9HCC0 563 aa19.09■□□□□ 0.65
CPNE1-204ENST00000397443 UBAP1Q9NZ09 502 aa19.09■□□□□ 0.65
CPNE1-204ENST00000397443 NDRG4Q9ULP0 352 aaKnown RBP19.09■□□□□ 0.65
CPNE1-204ENST00000397443 LRCH1Q9Y2L9 728 aa19.09■□□□□ 0.65
CPNE1-204ENST00000397443 H0YC42 278 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 ACOT7O00154 380 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 HIST1H2ABP04908 130 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 FAM87AP0C7U9 286 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 IMPDH2P12268 514 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 SLC9A3P48764 834 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 NUP107P57740 925 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 IL5RAQ01344 420 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 KRT80Q6KB66 452 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 SMARCD3Q6STE5 483 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 HIST3H2AQ7L7L0 130 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 NANOGNBQ7Z5D8 188 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 CCDC71Q8IV32 467 aaPredicted RBP19.08■□□□□ 0.65
CPNE1-204ENST00000397443 FAM98AQ8NCA5 519 aaKnown RBP19.08■□□□□ 0.65
CPNE1-204ENST00000397443 OSTF1Q92882 214 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 HIST1H2ACQ93077 130 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 HRASLS5Q96KN8 279 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 RASSF1Q9NS23 344 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 IL20Q9NYY1 176 aa19.08■□□□□ 0.65
CPNE1-204ENST00000397443 ZAR1LA6NP61 321 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 SEC14L5O43304 696 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 PTP4A3O75365 173 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 ITGB2P05107 769 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 BMP7P18075 431 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 ELK4P28324 431 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 GRPRP30550 384 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 IDUAP35475 653 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 AQP2P41181 271 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 MLLT10P55197 1068 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 FHL1Q13642 323 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 USP51Q70EK9 711 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 C8orf59Q8N0T1 100 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-204ENST00000397443 RBMXL3Q8N7X1 1067 aaKnown RBP19.08■□□□□ 0.64
CPNE1-204ENST00000397443 OR52L1Q8NGH7 329 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 MOSPD2Q8NHP6 518 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 ARHGAP9Q9BRR9 750 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 FKRPQ9H9S5 495 aa19.08■□□□□ 0.64
CPNE1-204ENST00000397443 OR2T1O43869 369 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 RCBTB2O95199 551 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 HPNP05981 417 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 ASAH2BP0C7U1 165 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 GTF2E2P29084 291 aaKnown RBP19.07■□□□□ 0.64
CPNE1-204ENST00000397443 GIPRP48546 466 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 KEAP1Q14145 624 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 PDK3Q15120 406 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 ACSM5Q6NUN0 579 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 C5orf46Q6UWT4 87 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 MAMDC2Q7Z304 686 aaPredicted RBP19.07■□□□□ 0.64
CPNE1-204ENST00000397443 SLC25A43Q8WUT9 341 aaPredicted RBP19.07■□□□□ 0.64
CPNE1-204ENST00000397443 DTNBP1Q96EV8 351 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 IFT27Q9BW83 186 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 TAPBPLQ9BX59 468 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 ZNF229Q9UJW7 825 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 LIPGQ9Y5X9 500 aa19.07■□□□□ 0.64
CPNE1-204ENST00000397443 ACACBO00763 2458 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 M0R082 166 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 TFECO14948 347 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-204ENST00000397443 SERPINI2O75830 405 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 IGF2P01344 180 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 ZNF24P17028 368 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 MYF6P23409 242 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 GGT2P36268 569 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 RPL4P36578 427 aaKnown RBP19.06■□□□□ 0.64
CPNE1-204ENST00000397443 MAP2K6P52564 334 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 CLDN20P56880 219 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 ZNF691Q5VV52 312 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 SLC27A4Q6P1M0 643 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 ASB18Q6ZVZ8 466 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 FAM109AQ8N4B1 249 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 OR4Q3Q8NH05 313 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 ZNF417Q8TAU3 575 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 ZNF587Q96SQ5 575 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-204ENST00000397443 PITX2Q99697 317 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 IMPAD1Q9NX62 359 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 TVP23BQ9NYZ1 205 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 TNFRSF10DQ9UBN6 386 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 C11orf98E9PRG8 122 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 F13BP05160 661 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 POU3F2P20265 443 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-204ENST00000397443 OR2B6P58173 313 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 RAC1P63000 192 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 SLC10A1Q14973 349 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 APOL4Q9BPW4 351 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 POTEKPQ9BYX7 375 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 LDAHQ9H6V9 325 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 EXO5Q9H790 373 aa19.06■□□□□ 0.64
CPNE1-204ENST00000397443 MRPS18CQ9Y3D5 142 aaKnown RBP19.06■□□□□ 0.64
CPNE1-204ENST00000397443 LIPT2A6NK58 231 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 MCIDASD6RGH6 385 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 FTCDNL1E5RQL4 147 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 TNFSF11O14788 317 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 AKR7A3O95154 331 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms