RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 HIF3AQ9Y2N7 669 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 MGAQ8IWI9 3026 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 BMP7P18075 431 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 C19orf57Q0VDD7 668 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 CDK5R2Q13319 367 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 HYAL4Q2M3T9 481 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.78■■□□□ 1.56
CPNE1-203ENST00000397442 SLC6A19Q695T7 634 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 IGFL3Q6UXB1 125 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 DEPDC4Q8N2C3 294 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 OR2T33Q8NG76 320 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 SLC25A43Q8WUT9 341 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-203ENST00000397442 APH1BQ8WW43 257 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 PIGQQ9BRB3 760 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 SPIN1Q9Y657 262 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-203ENST00000397442 OR2T1O43869 369 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 WBP4O75554 376 aaKnown RBP24.77■■□□□ 1.56
CPNE1-203ENST00000397442 IMPDH2P12268 514 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 UQCRC1P31930 480 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 EFNB1P98172 346 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 PGGHGQ32M88 737 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 PNPLA5Q7Z6Z6 429 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-203ENST00000397442 OR52L1Q8NGH7 329 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 OR14L1PQ8NHC6 308 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 MFSD8Q8NHS3 518 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 SLC25A36Q96CQ1 311 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 ADNPQ9H2P0 1102 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 IMPAD1Q9NX62 359 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 SEC14L4Q9UDX3 406 aa24.77■■□□□ 1.56
CPNE1-203ENST00000397442 ANKRD11Q6UB99 2663 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-203ENST00000397442 C1QTNF9BB2RNN3 333 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 FZD7O75084 574 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 NDUFB2O95178 105 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 OPN1LWP04000 364 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 C1QTNF9P0C862 333 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 TFPIP10646 304 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 FKBP2P26885 142 aaKnown RBP24.76■■□□□ 1.55
CPNE1-203ENST00000397442 MAMDC2Q7Z304 686 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-203ENST00000397442 CCDC103Q8IW40 242 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 SLC43A2Q8N370 569 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 ZNF786Q8N393 782 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 MOSPD2Q8NHP6 518 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 TVP23BQ9NYZ1 205 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 B4GALT7Q9UBV7 327 aa24.76■■□□□ 1.55
CPNE1-203ENST00000397442 MCIDASD6RGH6 385 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 TRAPPC6AO75865 159 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 HPNP05981 417 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 LYNP07948 512 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 MYBPHQ13203 477 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 ANKDD1AQ495B1 522 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 WIPI1Q5MNZ9 446 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-203ENST00000397442 C6orf141Q5SZD1 244 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 CASP12Q6UXS9 341 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 LNX2Q8N448 690 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 TMEM251Q8N6I4 163 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 LRRC75AQ8NAA5 344 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 LIPT2A6NK58 231 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 FAM166BA8MTA8 275 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 BLOC1S5-TXNDC5H3BN57 136 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 TAF4O00268 1085 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 CELA3AP09093 270 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 GRPRP30550 384 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 IDUAP35475 653 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 AQP2P41181 271 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 CLK1P49759 484 aaKnown RBP24.75■■□□□ 1.55
CPNE1-203ENST00000397442 PRPS1P60891 318 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 BORAQ6PGQ7 559 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 LRRC69Q6ZNQ3 347 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 NANOGNBQ7Z5D8 188 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 IFT27Q9BW83 186 aa24.75■■□□□ 1.55
CPNE1-203ENST00000397442 POLDIP3Q9BY77 421 aaKnown RBP24.75■■□□□ 1.55
CPNE1-203ENST00000397442 TRAV17A0A0B4J275 112 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 PRKYO43930 277 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 PDGFAP04085 211 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 SLC6A6P31641 620 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 SFTPDP35247 375 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 MAGEA5P43359 124 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 PCYT1AP49585 367 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 PLGLB1Q02325 96 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 RPL18Q07020 188 aaKnown RBP24.74■■□□□ 1.55
CPNE1-203ENST00000397442 TMEM176BQ3YBM2 270 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-203ENST00000397442 PTCHD4Q6ZW05 846 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 IGFN1Q86VF2 1251 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 OR5J2Q8NH18 312 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 DTNBP1Q96EV8 351 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 IL4I1Q96RQ9 567 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 GPX7Q96SL4 187 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-203ENST00000397442 TAS2R5Q9NYW4 299 aa24.74■■□□□ 1.55
CPNE1-203ENST00000397442 PTPRQQ9UMZ3 2332 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 A0A1W2PNR3 127 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 HIST1H2ABP04908 130 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 GFRA1P56159 465 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 TMPRSS3P57727 454 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 SNRPGP62308 76 aaKnown RBP24.73■■□□□ 1.55
CPNE1-203ENST00000397442 RAC1P63000 192 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 OR7A5Q15622 319 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 SGCBQ16585 318 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 HIST3H2AQ7L7L0 130 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 TCEANCQ8N8B7 351 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 OR8J1Q8NGP2 316 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms