RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 NPR2P20594 1047 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 MDKP21741 143 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-203ENST00000397378 PRTN3P24158 256 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 FPR2P25090 351 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 CALCRP30988 508 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 HTR3AP46098 478 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 MAP2K6P52564 334 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 UBE2NP61088 152 aaKnown RBP8.12□□□□□ -1.11
NEDD9-203ENST00000397378 HGFACQ04756 655 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 ADRM1Q16186 407 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 SPDYE7PQ495Y7 208 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 VAX1Q5SQQ9 334 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 VHLLQ6RSH7 139 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 Q6ZPA2 131 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 C17orf107Q6ZR85 190 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 ZCCHC24Q8N2G6 241 aaKnown RBP8.12□□□□□ -1.11
NEDD9-203ENST00000397378 ZIC4Q8N9L1 334 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 OR5D16Q8NGK9 328 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 OR1K1Q8NGR3 316 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 NANPQ8TBE9 248 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 COQ8BQ96D53 544 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 DNAJA3Q96EY1 480 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 ANKRD27Q96NW4 1050 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 FMO2Q99518 471 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 RACGAP1Q9H0H5 632 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 TUBB1Q9H4B7 451 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 EXOSC3Q9NQT5 275 aaKnown RBP8.12□□□□□ -1.11
NEDD9-203ENST00000397378 ATAD3AQ9NVI7 634 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 ZDHHC2Q9UIJ5 367 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 MKLN1Q9UL63 735 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 ARHGAP32A7KAX9 2087 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 TMED7-TICAM2A0A0A6YYA0 188 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 TRAV20A0A0B4J274 112 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 DNAJC9-AS1A6NH13 148 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 TMEM114B3SHH9 223 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 LYNX1G3V0Z9 82 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 AZIN1O14977 448 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 BCAS1O75363 584 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-203ENST00000397378 PRSS23O95084 383 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 C6orf47O95873 294 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 PROCP04070 461 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 ABHD2P08910 425 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 LYNX1P0DP58 116 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 MATN1P21941 496 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 RYKP34925 604 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 THBS4P35443 961 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 IL1RL1Q01638 556 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 MAPK14Q16539 360 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 LIPMQ5VYY2 423 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 LEG1Q6P5S2 330 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 EMBQ6PCB8 327 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 BRICD5Q6PL45 260 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 AAED1Q7RTV5 226 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 SPATA21Q7Z572 469 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 SIGLECL1Q8N7X8 197 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 OR9K2Q8NGE7 335 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 CKAP2Q8WWK9 683 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 BCL2L2Q92843 193 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-203ENST00000397378 DDIT4LQ96D03 193 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 AURKBQ96GD4 344 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-203ENST00000397378 ZNF385AQ96PM9 386 aaKnown RBP8.11□□□□□ -1.11
NEDD9-203ENST00000397378 SERHL2Q9H4I8 314 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 YY1AP1Q9H869 796 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 DYNLRB1Q9NP97 96 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 SLC52A3Q9NQ40 469 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 POLE3Q9NRF9 147 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 TREM2Q9NZC2 230 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 TMED7Q9Y3B3 224 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 DNAJC15Q9Y5T4 150 aa8.11□□□□□ -1.11
NEDD9-203ENST00000397378 OR6C65A6NJZ3 312 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 ZNF587BE7ETH6 402 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 TIMM23O14925 209 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 GLRA3O75311 464 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 LYPLA1O75608 230 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-203ENST00000397378 KRT33AO76009 404 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 LGI1O95970 557 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 CHEK2O96017 543 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 KNG1P01042 644 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 PRB2P02812 416 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-203ENST00000397378 LINC00032P0C843 101 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 GAAP10253 952 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 SAGP10523 405 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-203ENST00000397378 MAPK1P28482 360 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 ECHS1P30084 290 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 IDH2P48735 452 aaKnown RBP8.1□□□□□ -1.11
NEDD9-203ENST00000397378 EVX1P49640 407 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 POLR2HP52434 150 aaKnown RBP8.1□□□□□ -1.11
NEDD9-203ENST00000397378 SH3BGRP55822 239 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-203ENST00000397378 ETF1P62495 437 aaKnown RBP8.1□□□□□ -1.11
NEDD9-203ENST00000397378 RPS26P62854 115 aaKnown RBP8.1□□□□□ -1.11
NEDD9-203ENST00000397378 HBA1P69905 142 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 PLAURQ03405 335 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 CCDC153Q494R4 210 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 GALNTL6Q49A17 601 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 SLC9B1Q4ZJI4 515 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 OTUD3Q5T2D3 398 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-203ENST00000397378 OLIG3Q7RTU3 272 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 C16orf62Q7Z3J2 963 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 C6orf120Q7Z4R8 191 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 CDK20Q8IZL9 346 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms