RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 SFXN2Q96NB2 322 aa9.44□□□□□ -0.9
NUP98-205ENST00000397007 TMEFF2Q9UIK5 374 aaPredicted RBP9.44□□□□□ -0.9
NUP98-205ENST00000397007 RPH3AQ9Y2J0 694 aaPredicted RBP9.44□□□□□ -0.9
NUP98-205ENST00000397007 KRT36O76013 467 aa9.44□□□□□ -0.9
NUP98-205ENST00000397007 TRAM2Q15035 370 aa9.44□□□□□ -0.9
NUP98-205ENST00000397007 SHQ1Q6PI26 577 aaKnown RBP9.44□□□□□ -0.9
NUP98-205ENST00000397007 FOXL2NBQ6ZUU3 175 aa9.44□□□□□ -0.9
NUP98-205ENST00000397007 ZNF519Q8TB69 540 aa9.44□□□□□ -0.9
NUP98-205ENST00000397007 ITLN2Q8WWU7 325 aaPredicted RBP9.44□□□□□ -0.9
NUP98-205ENST00000397007 JSRP1Q96MG2 331 aaPredicted RBP9.44□□□□□ -0.9
NUP98-205ENST00000397007 MRPL13Q9BYD1 178 aaKnown RBP9.44□□□□□ -0.9
NUP98-205ENST00000397007 PLSCR4Q9NRQ2 329 aa9.44□□□□□ -0.9
NUP98-205ENST00000397007 TINAGQ9UJW2 476 aa9.44□□□□□ -0.9
NUP98-205ENST00000397007 FAM208BQ5VWN6 2430 aa9.44□□□□□ -0.9
NUP98-205ENST00000397007 ZGRF1Q86YA3 2104 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 OR7A10O76100 309 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 UQCRBP14927 111 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 ITGA2P17301 1181 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 IDUAP35475 653 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 PPP2R2BQ00005 443 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 RAET1LQ5VY80 246 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 OR2T5Q6IEZ7 315 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 OR2T29Q8NH02 315 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 VANGL1Q8TAA9 524 aaPredicted RBP9.43□□□□□ -0.9
NUP98-205ENST00000397007 TPD52L3Q96J77 140 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 ERRFI1Q9UJM3 462 aaPredicted RBP9.43□□□□□ -0.9
NUP98-205ENST00000397007 SIGLEC7Q9Y286 467 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 TTLL8A6PVC2 850 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 POU3F2P20265 443 aaPredicted RBP9.43□□□□□ -0.9
NUP98-205ENST00000397007 FPR3P25089 353 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 AGTR1P30556 359 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 MXRA7P84157 204 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 SGCBQ16585 318 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 MICAQ29983 383 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 ZNF362Q5T0B9 420 aaPredicted RBP9.43□□□□□ -0.9
NUP98-205ENST00000397007 TBPL2Q6SJ96 375 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 GFRALQ6UXV0 394 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 STARD4Q96DR4 205 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 GLRX2Q9NS18 164 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 hCG_2039718K7EN88 272 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 GSTA4O15217 222 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 EDNRAP25101 427 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 ARMC4Q5T2S8 1044 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 TMEM27Q9HBJ8 222 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 S100A14Q9HCY8 104 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 SPIN1Q9Y657 262 aaPredicted RBP9.43□□□□□ -0.9
NUP98-205ENST00000397007 DCHS2Q6V1P9 2916 aa9.43□□□□□ -0.9
NUP98-205ENST00000397007 CENPBD1B2RD01 187 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 RPL36A-HNRNPH2H7BZ11 118 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 H1F0P07305 194 aaKnown RBP9.42□□□□□ -0.9
NUP98-205ENST00000397007 CD8BP10966 210 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 COX5AP20674 150 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 FOXF2Q12947 444 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 RPTNQ6XPR3 784 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 MAMDC2Q7Z304 686 aaPredicted RBP9.42□□□□□ -0.9
NUP98-205ENST00000397007 CCDC120Q96HB5 630 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 USE1Q9NZ43 259 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 TNFRSF10DQ9UBN6 386 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 DNAJB9Q9UBS3 223 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 ZNF629Q9UEG4 869 aaPredicted RBP9.42□□□□□ -0.9
NUP98-205ENST00000397007 B3GALT5Q9Y2C3 310 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 FLVCR1Q9Y5Y0 555 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 ZNF462Q96JM2 2506 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 A0A1W2PNR3 127 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 RRM2P31350 389 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 SLC9A3P48764 834 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 KDM4DQ6B0I6 523 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 PLXDC2Q6UX71 529 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 SLC43A2Q8N370 569 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 ANKK1Q8NFD2 765 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 CCDC124Q96CT7 223 aaKnown RBP9.42□□□□□ -0.9
NUP98-205ENST00000397007 GMPPAQ96IJ6 420 aaPredicted RBP9.42□□□□□ -0.9
NUP98-205ENST00000397007 ENKD1Q9H0I2 346 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 CSMD2Q7Z408 3487 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 POLEQ07864 2286 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 CNOT4O95628 575 aaKnown RBP9.42□□□□□ -0.9
NUP98-205ENST00000397007 ENPP1P22413 925 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 SLC35A1P78382 337 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 FAM98BQ52LJ0 330 aaKnown RBP9.42□□□□□ -0.9
NUP98-205ENST00000397007 WLSQ5T9L3 541 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 HBMQ6B0K9 141 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 ZFP1Q6P2D0 407 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 LINGO2Q7L985 606 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 LRRC17Q8N6Y2 441 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 ZNF614Q8N883 585 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 TMEM54Q969K7 222 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 IL20Q9NYY1 176 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 CORINQ9Y5Q5 1042 aa9.42□□□□□ -0.9
NUP98-205ENST00000397007 CACNA1BQ00975 2339 aa9.41□□□□□ -0.9
NUP98-205ENST00000397007 H3BML4 177 aa9.41□□□□□ -0.9
NUP98-205ENST00000397007 HNRNPRO43390 633 aaKnown RBP9.41□□□□□ -0.9
NUP98-205ENST00000397007 TRAPPC6AO75865 159 aa9.41□□□□□ -0.9
NUP98-205ENST00000397007 DIRAS1O95057 198 aa9.41□□□□□ -0.9
NUP98-205ENST00000397007 ELF3P78545 371 aaPredicted RBP9.41□□□□□ -0.9
NUP98-205ENST00000397007 EXOC3L2Q2M3D2 409 aa9.41□□□□□ -0.9
NUP98-205ENST00000397007 TMEM176BQ3YBM2 270 aaPredicted RBP9.41□□□□□ -0.9
NUP98-205ENST00000397007 DEF8Q6ZN54 512 aa9.41□□□□□ -0.9
NUP98-205ENST00000397007 CREB3L2Q70SY1 520 aa9.41□□□□□ -0.9
NUP98-205ENST00000397007 PARP8Q8N3A8 854 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms