RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 TMEM72A0PK05 275 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 DUXAA6NLW8 204 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 ZNF587BE7ETH6 402 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 G3V2L1 256 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 SYNGR3O43761 229 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 C6orf47O95873 294 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 HPXP02790 462 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 GSTA1P08263 222 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 NEFHP12036 1026 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 BCKDHAP12694 445 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 CCNA2P20248 432 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 HPCAL1P37235 193 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 RPL3P39023 403 aaKnown RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 HTR3AP46098 478 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 RPL38P63173 70 aaKnown RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 MYBPC1Q00872 1141 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 SLC7A5Q01650 507 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 LSM12Q3MHD2 195 aaKnown RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 SPDYE7PQ495Y7 208 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 OTUD3Q5T2D3 398 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 CLEC6AQ6EIG7 209 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 OLIG3Q7RTU3 272 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 NATD1Q8N6N6 113 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 TMEM99Q8N816 258 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 YIPF5Q969M3 257 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 KCNF1Q9H3M0 494 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 EXOSC3Q9NQT5 275 aaKnown RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 REV1Q9UBZ9 1251 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 EMCNQ9ULC0 261 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 CMAHPQ9Y471 501 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 OR6C65A6NJZ3 312 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 TMEM229AB2RXF0 380 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 J3QLI3 93 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 LSM1O15116 133 aaKnown RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 KRT33AO76009 404 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 FSHBP01225 129 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 ANPEPP15144 967 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 MATN1P21941 496 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 GCAP28676 217 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 RYKP34925 604 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 POLR2HP52434 150 aaKnown RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 MAP2K6P52564 334 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 SH3BGRP55822 239 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 DNAJB13P59910 316 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 MRPS11P82912 194 aaKnown RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 PLAURQ03405 335 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 DAG1Q14118 895 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 MSMPQ1L6U9 139 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 LIPMQ5VYY2 423 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 REP15Q6BDI9 236 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 ZYG11AQ6WRX3 759 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 RIBC1Q8N443 379 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 IL17RDQ8NFM7 739 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 NANPQ8TBE9 248 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 COQ8BQ96D53 544 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 LINC00470Q9BZP3 86 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 MS4A5Q9H3V2 200 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 TUBB1Q9H4B7 451 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 UNKLQ9H9P5 680 aaKnown RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 NTN4Q9HB63 628 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 ZNF275Q9NSD4 429 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 DDX28Q9NUL7 540 aaKnown RBP7.25□□□□□ -1.25
SCFD1-202ENST00000396629 OSGIN1Q9UJX0 560 aa7.25□□□□□ -1.25
SCFD1-202ENST00000396629 A0A096LPE4 126 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 A0A1W2PPZ6 126 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 ZC3H12DA2A288 527 aaKnown RBP7.24□□□□□ -1.25
SCFD1-202ENST00000396629 LIPT2A6NK58 231 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 AQP7P3A6NL99 342 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 SKAP2O75563 359 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-202ENST00000396629 UPK3AO75631 287 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 RP2O75695 350 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 GSNP06396 782 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 MYL2P10916 166 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 IDH2P48735 452 aaKnown RBP7.24□□□□□ -1.25
SCFD1-202ENST00000396629 SELENOPP49908 381 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 P2RY4P51582 365 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 ETF1P62495 437 aaKnown RBP7.24□□□□□ -1.25
SCFD1-202ENST00000396629 RPS26P62854 115 aaKnown RBP7.24□□□□□ -1.25
SCFD1-202ENST00000396629 SNTB2Q13425 540 aaKnown RBP7.24□□□□□ -1.25
SCFD1-202ENST00000396629 ATP6AP1LQ52LC2 224 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 TYW3Q6IPR3 259 aaKnown RBP7.24□□□□□ -1.25
SCFD1-202ENST00000396629 ACSM5Q6NUN0 579 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 CREB3L2Q70SY1 520 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 LSRQ86X29 649 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-202ENST00000396629 BPIFB2Q8N4F0 458 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 ARFGAP2Q8N6H7 521 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 OR5AK3PQ8NH89 298 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 ACMSDQ8TDX5 336 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 DVL3Q92997 716 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-202ENST00000396629 MRPL37Q9BZE1 423 aaKnown RBP7.24□□□□□ -1.25
SCFD1-202ENST00000396629 POLE3Q9NRF9 147 aa7.24□□□□□ -1.25
SCFD1-202ENST00000396629 A0A087WUV0 522 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-202ENST00000396629 POM121CA8CG34 1229 aa7.23□□□□□ -1.25
SCFD1-202ENST00000396629 RPL36A-HNRNPH2H7BZ11 118 aa7.23□□□□□ -1.25
SCFD1-202ENST00000396629 M0R233 179 aa7.23□□□□□ -1.25
SCFD1-202ENST00000396629 AZIN1O14977 448 aa7.23□□□□□ -1.25
SCFD1-202ENST00000396629 PIP5K1BO14986 540 aa7.23□□□□□ -1.25
SCFD1-202ENST00000396629 PPIHO43447 177 aaKnown RBP7.23□□□□□ -1.25
SCFD1-202ENST00000396629 PLPP2O43688 288 aa7.23□□□□□ -1.25
SCFD1-202ENST00000396629 AKR7A3O95154 331 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms