RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 NPIPA8P0DM63 369 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 POU3F2P20265 443 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 FAM57BQ71RH2 274 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 SUSD2Q9UGT4 822 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 MIA3Q5JRA6 1907 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 ADAM23O75077 832 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 PRSS56P0CW18 603 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 GLYR1Q49A26 553 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 TMEM59Q9BXS4 323 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 C20orf85Q9H1P6 137 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 RBFOX1Q9NWB1 397 aaKnown RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 HEPACAM2A8MVW5 462 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 MCRIP1C9JLW8 97 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 NTSR1P30989 418 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 HTR6P50406 440 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 FIBINQ8TAL6 211 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 GGHQ92820 318 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 OR7D2Q96RA2 312 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 NTMT1Q9BV86 223 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 TPPP3Q9BW30 176 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 IL26Q9NPH9 171 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 MYOTQ9UBF9 498 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 KIF13AQ9H1H9 1805 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 HSPB6O14558 160 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CLDN1O95832 211 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 PSMB1P20618 241 aaKnown RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 OPRD1P41143 372 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 GPLD1P80108 840 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 HBMQ6B0K9 141 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 ZNF761Q86XN6 746 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 A0A087WZY1 265 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 MAN2B1O00754 1011 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 SOCS6O14544 535 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 DVL1O14640 695 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 TRAF3IP2O43734 574 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 TACR3P29371 465 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 DVL1P1P54792 670 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 OR2T11Q8NH01 316 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 FOXJ1Q92949 421 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 RBPMSQ93062 196 aaKnown RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 SLC41A2Q96JW4 573 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 NRIP3Q9NQ35 241 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 SCG5P05408 212 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CT45A6P0DMU7 189 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CT45A5P0DMU8 189 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CT45A7P0DMV0 189 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CT45A8P0DMV1 189 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CT45A9P0DMV2 189 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CT45A2Q5DJT8 189 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CT45A1Q5HYN5 189 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 C3orf38Q5JPI3 329 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 OR52R1Q8NGF1 315 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CT45A3Q8NHU0 189 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 MRPL38Q96DV4 380 aaKnown RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 PSD2Q9BQI7 771 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 POFUT1Q9H488 388 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 ENTPD2Q9Y5L3 495 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 SEMA4FO95754 770 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 GM2AP17900 193 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 S100A11P31949 105 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 INHBCP55103 352 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 MTCP1P56278 107 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 PLK5Q496M5 336 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 FBXL4Q9UKA2 621 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 TRAPPC2LQ9UL33 140 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 HMGN2P05204 90 aaKnown RBP13.04□□□□□ -0.32
COL4A3-202ENST00000396578 IDUAP35475 653 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 ARG2P78540 354 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 FAM111BQ6SJ93 734 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 YIPF5Q969M3 257 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 C1orf198Q9H425 327 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 NTN4Q9HB63 628 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 SCML1Q9UN30 329 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 GPRIN2O60269 458 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 EIF4EP06730 217 aaKnown RBP13.04□□□□□ -0.32
COL4A3-202ENST00000396578 GDNFP39905 211 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 PITX1P78337 314 aaPredicted RBP13.04□□□□□ -0.32
COL4A3-202ENST00000396578 KIR2DS3Q14952 304 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 OR7E24Q6IFN5 339 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 ZCCHC4Q9H5U6 513 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 ISYNA1Q9NPH2 558 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 MED17Q9NVC6 651 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 WDR5BQ86VZ2 330 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 FRMD1Q8N878 549 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 SECTM1Q8WVN6 248 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 PBX4Q9BYU1 374 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 ARV1Q9H2C2 271 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 KCNIP2Q9NS61 270 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 NWD2Q9ULI1 1742 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 FABP7O15540 132 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 ALPLP05186 524 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 ADIRFQ15847 76 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 VN1R3Q9BXE9 311 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 TXLNGYQ9BZA5 131 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 PIK3C2AO00443 1686 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 FAM155AB1AL88 458 aaPredicted RBP13.04□□□□□ -0.32
COL4A3-202ENST00000396578 CYTIPO60759 359 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 DHRS4L1P0CG22 281 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms