RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ABHD17CQ6PCB6 329 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ZNF547Q8IVP9 402 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ZNF248Q8NDW4 579 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ATOH1Q92858 354 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 TRMT61AQ96FX7 289 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 OR8D2Q9GZM6 311 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 SEMA6CQ9H3T2 930 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 TCF7L1Q9HCS4 588 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 SMCO4Q9NRQ5 59 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 RARRES3Q9UL19 164 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 EXO1Q9UQ84 846 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 ASXL3Q9C0F0 2248 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 PATJQ8NI35 1801 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 TRBV23-1A0A0A0MS06 115 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 A0A0A6YYC8 382 aaPredicted RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 A0A1B0GVT2 93 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 RPS10-NUDT3A0A1W2PQS6 291 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 ANHXE9PGG2 379 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 I3L1I5 382 aaPredicted RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 SGK494L7N484 410 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 UPK1AO00322 258 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 PLPP1O14494 284 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 KHNYNO15037 678 aaKnown RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 RGS9O75916 674 aaPredicted RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 AK1P00568 194 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 IFNA10P01566 189 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 HEXBP07686 556 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 PRPH2P23942 346 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 RPS10P46783 165 aaKnown RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 EVX1P49640 407 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 UBE2IP63279 158 aaKnown RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 RBM39Q14498 530 aaKnown RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 TOMM20Q15388 145 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 NR0B2Q15466 257 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 MANEAQ5SRI9 462 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 TMEM69Q5SWH9 247 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 C6orf132Q5T0Z8 1188 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 FAM69AQ5T7M9 428 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 HACD4Q5VWC8 232 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 MAMSTRQ6ZN01 415 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 CBLL1Q75N03 491 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 SERPINA12Q8IW75 414 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 ST7LQ8TDW4 575 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 WDFY2Q96P53 400 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 PCED1AQ9H1Q7 454 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 EVA1AQ9H8M9 152 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 C1GALT1Q9NS00 363 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 THSD1Q9NS62 852 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 C19orf25Q9UFG5 118 aaPredicted RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 COLQQ9Y215 455 aaPredicted RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 GPR52Q9Y2T5 361 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 KCNIP3Q9Y2W7 256 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 MIA3Q5JRA6 1907 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 SPTY2D1-AS1A0A0U1RR47 76 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 ANTXRLA6NF34 631 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 ZNF705GA8MUZ8 300 aaPredicted RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 TRIM77I1YAP6 450 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 SCDO00767 359 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 PLA2G10O15496 165 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 RDH16O75452 317 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 ADAP00813 363 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 LINC00271P0C7V0 271 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 PRR35P0CG20 571 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 NKX6-1P78426 367 aaPredicted RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 ENPP2Q13822 863 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 SNTB1Q13884 538 aaKnown RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 SERTAD2Q14140 314 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 SLC5A12Q1EHB4 618 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 LEXMQ3ZCV2 418 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 C14orf28Q4W4Y0 310 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 SLC27A4Q6P1M0 643 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 BAIAP2L2Q6UXY1 529 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 RNF44Q7L0R7 432 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 KCTD9Q7L273 389 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 LIX1LQ8IVB5 337 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 ARMC10Q8N2F6 343 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 ARL14Q8N4G2 192 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 C19orf47Q8N9M1 422 aaKnown RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 OR4M1Q8NGD0 313 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 OR52E4Q8NGH9 312 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 OR9A2Q8NGT5 310 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 OR2T4Q8NH00 348 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 OR8S1Q8NH09 359 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 MAFAQ8NHW3 353 aaPredicted RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 DOK4Q8TEW6 326 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 CASTOR1Q8WTX7 329 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 C15orf40Q8WUR7 153 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 DAZLQ92904 295 aaKnown RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 RAB3CQ96E17 227 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 GPR137Q96N19 417 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 MCHR1Q99705 422 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 NIPSNAP1Q9BPW8 284 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 G6PC3Q9BUM1 346 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 KATNB1Q9BVA0 655 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 CDCA4Q9BXL8 241 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 TBL1XR1Q9BZK7 514 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 GHITMQ9H3K2 345 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 HRH4Q9H3N8 390 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 MTHFD2LQ9H903 347 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms