RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 TNFRSF10DQ9UBN6 386 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 FBXL4Q9UKA2 621 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 PCSK5Q92824 1860 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 TRAV36DV7A0A075B6V5 113 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 TMED7-TICAM2A0A0A6YYA0 188 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 TMEM72A0PK05 275 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 C4orf47A7E2U8 309 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 M0R3G1 203 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 IDH3BO43837 385 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 CLPXO76031 633 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 CLUP10909 449 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 PRKCAP17252 672 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 RPL4P36578 427 aaKnown RBP13.57□□□□□ -0.24
CCT4-201ENST00000394440 CD79BP40259 229 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 AQP2P41181 271 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 DBPQ10586 325 aaPredicted RBP13.57□□□□□ -0.24
CCT4-201ENST00000394440 ZNF791Q3KP31 576 aaPredicted RBP13.57□□□□□ -0.24
CCT4-201ENST00000394440 SDR9C7Q8NEX9 313 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 OR52E2Q8NGJ4 325 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 OR51G2Q8NGK0 314 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 ARHGAP9Q9BRR9 750 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 KATNB1Q9BVA0 655 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 TMED7Q9Y3B3 224 aa13.57□□□□□ -0.24
CCT4-201ENST00000394440 C2orf72A6NCS6 295 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 SUSD5O60279 629 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 MT-CO3P00414 261 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 INHBBP09529 407 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 RAB40ALP0C0E4 278 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 JMJD7P0C870 316 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 PAICSP22234 425 aaKnown RBP13.56□□□□□ -0.24
CCT4-201ENST00000394440 RPS5P46782 204 aaKnown RBP13.56□□□□□ -0.24
CCT4-201ENST00000394440 CLK1P49759 484 aaKnown RBP13.56□□□□□ -0.24
CCT4-201ENST00000394440 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCT4-201ENST00000394440 DYNC1I2Q13409 638 aaKnown RBP13.56□□□□□ -0.24
CCT4-201ENST00000394440 TIMM50Q3ZCQ8 353 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 SOWAHCQ53LP3 525 aaPredicted RBP13.56□□□□□ -0.24
CCT4-201ENST00000394440 C1QL3Q5VWW1 255 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 OR5M10Q6IEU7 315 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 PHC2Q8IXK0 858 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 OR4K13Q8NH42 304 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 CT55Q8WUE5 264 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 SECISBP2Q96T21 854 aaKnown RBP13.56□□□□□ -0.24
CCT4-201ENST00000394440 CENPOQ9BU64 300 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 SLC24A3Q9HC58 644 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 TCFL5Q9UL49 500 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 CCDC187A0A096LP49 1063 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 FOXD2O60548 495 aaPredicted RBP13.56□□□□□ -0.24
CCT4-201ENST00000394440 ITGA10O75578 1167 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 CD14P08571 375 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 CPEP16870 476 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 HTR3AP46098 478 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 RPL18Q07020 188 aaKnown RBP13.56□□□□□ -0.24
CCT4-201ENST00000394440 EIF3IQ13347 325 aaKnown RBP13.56□□□□□ -0.24
CCT4-201ENST00000394440 KLHL12Q53G59 568 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 NDUFAF7Q7L592 441 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 PPP1R32Q7Z5V6 425 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 LHFPL3Q86UP9 236 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 ARMC10Q8N2F6 343 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 C10orf53Q8N6V4 93 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 NPEPL1Q8NDH3 523 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 OR52N1Q8NH53 320 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 TMEM234Q8WY98 164 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 ZHX1-C8orf76Q96EF9 292 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 NPAS1Q99742 590 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 NMNAT2Q9BZQ4 307 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 DCSTAMPQ9H295 470 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 OR51V1Q9H2C8 321 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 KLRF1Q9NZS2 232 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 SLC6A5Q9Y345 797 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 WIF1Q9Y5W5 379 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 PMF1-BGLAPU3KQ54 211 aa13.56□□□□□ -0.24
CCT4-201ENST00000394440 KNTC1P50748 2209 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 A8MVM7 634 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 BLOC1S5-TXNDC5H3BN57 136 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 GPX5O75715 221 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 TXNDC12O95881 172 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 MT-ATP6P00846 226 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 ERVK-25P63136 954 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 TPBGQ13641 420 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 ALG10Q5BKT4 473 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 POMZP3Q6PJE2 187 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 NANOGNBQ7Z5D8 188 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 STK35Q8TDR2 534 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 DACH2Q96NX9 599 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 TIMP4Q99727 224 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 CHCHD6Q9BRQ6 235 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 ADGRL4Q9HBW9 690 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 PARD6AQ9NPB6 346 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 KLHL1Q9NR64 748 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 CHCHD2Q9Y6H1 151 aaPredicted RBP13.55□□□□□ -0.24
CCT4-201ENST00000394440 NSG1A0A0A6YYJ2 146 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 GYPBP06028 91 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 SBK2P0C263 348 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 TCN2P20062 427 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 MSX1P28360 303 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 CASP3P42574 277 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 RPS18P62269 152 aaKnown RBP13.55□□□□□ -0.24
CCT4-201ENST00000394440 TUBA1BP68363 451 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 ACSM1Q08AH1 577 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms