RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 DAZAP2Q15038 168 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 NRF1Q16656 503 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZSWIM7Q19AV6 140 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 ENTPD8Q5MY95 495 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 C9orf135Q5VTT2 229 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 CASP12Q6UXS9 341 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 WDR88Q6ZMY6 472 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 BEND4Q6ZU67 534 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 GALNT5Q7Z7M9 940 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 PATL1Q86TB9 770 aaKnown RBP6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 STK32CQ86UX6 486 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 WFDC8Q8IUA0 241 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC15A3Q8IY34 581 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZNF100Q8IYN0 542 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 LSMEM1Q8N8F7 131 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR2T12Q8NG77 320 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 PIGXQ8TBF5 258 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC26A7Q8TE54 656 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 TAAR8Q969N4 342 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 S100PBPQ96BU1 408 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 PIK3IP1Q96FE7 263 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 DACH2Q96NX9 599 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZNF385AQ96PM9 386 aaKnown RBP6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 MCHR1Q99705 422 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 SH3GL1Q99961 368 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 TAPBPLQ9BX59 468 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 POTEKPQ9BYX7 375 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 TRIM2Q9C040 744 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 MRGBPQ9NV56 204 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 TESQ9UGI8 421 aaKnown RBP6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 NDRG3Q9UGV2 375 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 TRAPPC4Q9Y296 219 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 NOSIPQ9Y314 301 aaKnown RBP6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 NAV2Q8IVL1 2488 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 FAM221AA4D161 298 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 AQP7P3A6NL99 342 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 M0R082 166 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 KPNA4O00629 521 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 CASKO14936 926 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 DNPH1O43598 174 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 LYPD3O95274 346 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 AHSA1O95433 338 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 NPPAP01160 153 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 PNMTP11086 282 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 NCK1P16333 377 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 FUT4P22083 530 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 IGHV1-2P23083 117 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 FKBP2P26885 142 aaKnown RBP6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 GRPRP30550 384 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 DNAJA1P31689 397 aaKnown RBP6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 GSK3BP49841 420 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 LTBQ06643 244 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC17A1Q14916 467 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 STK11Q15831 433 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 CYBRD1Q53TN4 286 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 INTS11Q5TA45 600 aaKnown RBP6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 C8orf82Q6P1X6 216 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 ULK3Q6PHR2 472 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 PAQR6Q6TCH4 344 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 C6orf89Q6UWU4 347 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 DEF8Q6ZN54 512 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 CCDC80Q76M96 950 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 PIGWQ7Z7B1 504 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 RANBP3LQ86VV4 465 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 CARM1Q86X55 608 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC30A8Q8IWU4 369 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 MICU2Q8IYU8 434 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 UBE2J2Q8N2K1 259 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 RNF148Q8N7C7 305 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZIC4Q8N9L1 334 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 RBM15BQ8NDT2 890 aaKnown RBP6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR9K2Q8NGE7 335 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZNF417Q8TAU3 575 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 STK35Q8TDR2 534 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC35B4Q969S0 331 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 APH1AQ96BI3 265 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 TPD52L3Q96J77 140 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 MOGAT1Q96PD6 335 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZNF587Q96SQ5 575 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 NAA11Q9BSU3 229 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 TMEM27Q9HBJ8 222 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC24A3Q9HC58 644 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 GP6Q9HCN6 339 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 ARL8BQ9NVJ2 186 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 EMC3Q9P0I2 261 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 PLEKHA6Q9Y2H5 1048 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 SH3GLB1Q9Y371 365 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 FLVCR1Q9Y5Y0 555 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 INTS1Q8N201 2190 aaKnown RBP6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 PKDREJQ9NTG1 2253 aa6.78□□□□□ -1.32
HMGB3P1-201ENST00000393368 TRAV36DV7A0A075B6V5 113 aa6.77□□□□□ -1.33
HMGB3P1-201ENST00000393368 A0A087WUJ7 227 aa6.77□□□□□ -1.33
HMGB3P1-201ENST00000393368 A0A1W2PR80 420 aa6.77□□□□□ -1.33
HMGB3P1-201ENST00000393368 ELOVL7A1L3X0 281 aa6.77□□□□□ -1.33
HMGB3P1-201ENST00000393368 EIF1BO60739 113 aaKnown RBP6.77□□□□□ -1.33
HMGB3P1-201ENST00000393368 MRPL33O75394 65 aaKnown RBP6.77□□□□□ -1.33
HMGB3P1-201ENST00000393368 RAD51DO75771 328 aa6.77□□□□□ -1.33
HMGB3P1-201ENST00000393368 HPRP00739 348 aa6.77□□□□□ -1.33
HMGB3P1-201ENST00000393368 PLAUP00749 431 aa6.77□□□□□ -1.33
HMGB3P1-201ENST00000393368 PSMB1P20618 241 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms