RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 M0R3G1 203 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 TCN2P20062 427 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 IL11P20809 199 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 CASP3P42574 277 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 RBM34P42696 430 aaKnown RBP13.6□□□□□ -0.23
MKS1-202ENST00000393119 QPRTQ15274 297 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 SDK2Q58EX2 2172 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 C3orf38Q5JPI3 329 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 SLC25A30Q5SVS4 291 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 PRAMEF20Q5VT98 475 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 TUBA3EQ6PEY2 450 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 SLC37A3Q8NCC5 494 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 ATP6V1C2Q8NEY4 427 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 HGDQ93099 445 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 TRMT61AQ96FX7 289 aaKnown RBP13.6□□□□□ -0.23
MKS1-202ENST00000393119 CENPOQ9BU64 300 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 ANKRD10Q9NXR5 420 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 PPIEQ9UNP9 301 aaKnown RBP13.6□□□□□ -0.23
MKS1-202ENST00000393119 YARS2Q9Y2Z4 477 aaKnown RBP13.6□□□□□ -0.23
MKS1-202ENST00000393119 MAGEB4O15481 346 aaPredicted RBP13.59□□□□□ -0.23
MKS1-202ENST00000393119 HCN1O60741 890 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 RCBTB2O95199 551 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 LALBAP00709 142 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 PIPP12273 146 aaPredicted RBP13.59□□□□□ -0.23
MKS1-202ENST00000393119 OTX2P32243 289 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 RPL4P36578 427 aaKnown RBP13.59□□□□□ -0.23
MKS1-202ENST00000393119 NR4A2P43354 598 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 RGS6P49758 472 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 ZNF181Q2M3W8 571 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 OR11G2Q8NGC1 345 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 GPR119Q8TDV5 335 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 SLC39A7Q92504 469 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 TM9SF4Q92544 642 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 TMEM203Q969S6 136 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 SLC25A36Q96CQ1 311 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 RASL10BQ96S79 203 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 CHCHD6Q9BRQ6 235 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 DEFB126Q9BYW3 111 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 NDEL1Q9GZM8 345 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 ADAM19Q9H013 955 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 TMEM9BQ9NQ34 198 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 TMEM5Q9Y2B1 443 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 MRPS18BQ9Y676 258 aaKnown RBP13.59□□□□□ -0.23
MKS1-202ENST00000393119 COL5A1P20908 1838 aaPredicted RBP13.59□□□□□ -0.23
MKS1-202ENST00000393119 TAF4O00268 1085 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 ZFAND5O76080 213 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 OR7A10O76100 309 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 JMJD7P0C870 316 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 ZNF74Q16587 644 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 ZNF791Q3KP31 576 aaPredicted RBP13.59□□□□□ -0.23
MKS1-202ENST00000393119 MEDAGQ5VYS4 303 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 IL20RBQ6UXL0 311 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 USP43Q70EL4 1123 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 BPHLQ86WA6 291 aaPredicted RBP13.59□□□□□ -0.23
MKS1-202ENST00000393119 KDM8Q8N371 416 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 RFLNBQ8N5W9 214 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 NANOGP1Q8N7R0 232 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 TMEM99Q8N816 258 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 OR5W2Q8NH69 310 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 NUBPLQ8TB37 319 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 TSSK2Q96PF2 358 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 NMNAT3Q96T66 252 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 EXOSC3Q9NQT5 275 aaKnown RBP13.59□□□□□ -0.23
MKS1-202ENST00000393119 KMT2EQ8IZD2 1858 aa13.59□□□□□ -0.23
MKS1-202ENST00000393119 SPENQ96T58 3664 aaKnown RBP13.59□□□□□ -0.23
MKS1-202ENST00000393119 TMEM72A0PK05 275 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 C9J4A7 227 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 H7C1C5 153 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 TPD52L2O43399 206 aaKnown RBP13.58□□□□□ -0.24
MKS1-202ENST00000393119 PTTG1O95997 202 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 F10P00742 488 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 LIMS3P0CW19 117 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 LIMS4P0CW20 117 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 NKX2-5P52952 324 aaPredicted RBP13.58□□□□□ -0.24
MKS1-202ENST00000393119 RPS7P62081 194 aaKnown RBP13.58□□□□□ -0.24
MKS1-202ENST00000393119 LCN6P62502 163 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 LIPKQ5VXJ0 399 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 STEAP3Q658P3 488 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 RTL4Q6ZR62 310 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 ADCK1Q86TW2 530 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 ADGRG3Q86Y34 549 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 C17orf47Q8NEP4 570 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 OR2Y1Q8NGV0 311 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 ELP5Q8TE02 316 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 CT55Q8WUE5 264 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 KISS1RQ969F8 398 aaPredicted RBP13.58□□□□□ -0.24
MKS1-202ENST00000393119 KATNB1Q9BVA0 655 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 WDR54Q9H977 334 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 ISG20L2Q9H9L3 353 aaKnown RBP13.58□□□□□ -0.24
MKS1-202ENST00000393119 MMP25Q9NPA2 562 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 WDR70Q9NW82 654 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 KLRF1Q9NZS2 232 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 PCSK5Q92824 1860 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 CENPBD1B2RD01 187 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 ITGA10O75578 1167 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 RAB36O95755 333 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 SPNP16150 400 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 PTGDSP41222 190 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 C19orf57Q0VDD7 668 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 SPHARQ15513 63 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms