RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MRI1Q9BV20 369 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 ULBP2Q9BZM5 246 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 MMP28Q9H239 520 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 KCNIP3Q9Y2W7 256 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 GMEB1Q9Y692 573 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 PRAMEF25A6NGN4 478 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 METTL12A8MUP2 240 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 C5orf67F2Z3F1 127 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 IL7P13232 177 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 VWA2Q5GFL6 755 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 KCTD20Q7Z5Y7 419 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 PARP16Q8N5Y8 322 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 OR5D14Q8NGL3 314 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 CDCP1Q9H5V8 836 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 LTBP1Q14766 1721 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 H0YIG0 161 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 PTH2RP49190 550 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 RAE1P78406 368 aaKnown RBP15.31■□□□□ 0.04
SCN3B-202ENST00000392770 CAMK2DQ13557 499 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 NKAIN1Q4KMZ8 207 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 ZBTB8BQ8NAP8 495 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-202ENST00000392770 OR5H2Q8NGV7 314 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 OR5M11Q96RB7 305 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 RANBP3Q9H6Z4 567 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-202ENST00000392770 THBS1P07996 1170 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 ZNF81P51508 661 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 RHOXF1Q8NHV9 184 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 THAP7Q9BT49 309 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-202ENST00000392770 OR51B6Q9H340 312 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.3■□□□□ 0.04
SCN3B-202ENST00000392770 TMEM72A0PK05 275 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 MPIG6BO95866 241 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 TEAD1P28347 426 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 PRSS3P35030 304 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 SNRPGP62308 76 aaKnown RBP15.3■□□□□ 0.04
SCN3B-202ENST00000392770 SLC35A1P78382 337 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 PLEKHN1Q494U1 663 aaPredicted RBP15.3■□□□□ 0.04
SCN3B-202ENST00000392770 SLC35D2Q76EJ3 337 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 RASD2Q96D21 266 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 POMT2Q9UKY4 750 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 HHLA2Q9UM44 414 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 BOLA2-SMG1P6H3BVE0 249 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 CREBL2O60519 120 aaPredicted RBP15.3■□□□□ 0.04
SCN3B-202ENST00000392770 SLC43A1O75387 559 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 SCGNO76038 276 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 OR2T7P0C7T2 308 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 OR2T27Q8NH04 317 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 CSF3RQ99062 836 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 WSB2Q9NYS7 404 aaPredicted RBP15.3■□□□□ 0.04
SCN3B-202ENST00000392770 ASPDHA6ND91 283 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 UPK1AO00322 258 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 CDK4P11802 303 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 DPP4P27487 766 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 EXT1Q16394 746 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 PLK5Q496M5 336 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 LRRC46Q96FV0 321 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 ATP13A2Q9NQ11 1180 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 COPZ2Q9P299 210 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 KCNE1BA0A087WTH5 132 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 FAM230AA0A1W2PPH8 454 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 NID1P14543 1247 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 TCN2P20062 427 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 CD22P20273 847 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 DUSP8Q13202 625 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 LOC102725191A0A1B0GVB3 256 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 A0A1B0GVC2 190 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 A6NIN4 97 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 ZNF35P13682 527 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 SPOCK1Q08629 439 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 NIPAL3Q6P499 406 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 FAM57BQ71RH2 274 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 ETFBKMTQ8IXQ9 262 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 RSPRY1Q96DX4 576 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 PADI1Q9ULC6 663 aa15.3■□□□□ 0.04
SCN3B-202ENST00000392770 GLB1P16278 677 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 DRD5P21918 477 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 LSSP48449 732 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 BIDP55957 195 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 ZNF775Q96BV0 537 aaPredicted RBP15.29■□□□□ 0.04
SCN3B-202ENST00000392770 M0R233 179 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 FXYD1O00168 92 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 MYF5P13349 255 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 TNFSF8P32971 234 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 HYAL4Q2M3T9 481 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 OR5J2Q8NH18 312 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 MAFAQ8NHW3 353 aaPredicted RBP15.29■□□□□ 0.04
SCN3B-202ENST00000392770 SLC7A13Q8TCU3 470 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 TSLPQ969D9 159 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 UBQLN3Q9H347 655 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 ANKRD10Q9NXR5 420 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 B3GNT3Q9Y2A9 372 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 GAPDHSO14556 408 aaPredicted RBP15.29■□□□□ 0.04
SCN3B-202ENST00000392770 DSCR3O14972 297 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 FASLGP48023 281 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 UBE2NLQ5JXB2 153 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 DESI1Q6ICB0 168 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 TMEM92Q6UXU6 159 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 CENPOQ9BU64 300 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 WDR76Q9H967 626 aa15.29■□□□□ 0.04
SCN3B-202ENST00000392770 MEIS3P1A6NDR6 274 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms