RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SLC6A5Q9Y345 797 aa10.39□□□□□ -0.75
SMARCAL1-203ENST00000392128 WIF1Q9Y5W5 379 aa10.39□□□□□ -0.75
SMARCAL1-203ENST00000392128 PCNX2A6NKB5 2137 aa10.39□□□□□ -0.75
SMARCAL1-203ENST00000392128 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 TMEM72A0PK05 275 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 CCDC182A6NF36 153 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 A8MVM7 634 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 TNFRSF10AO00220 468 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 ETV2O00321 342 aaPredicted RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 TP53I11O14683 189 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 AIREO43918 545 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 MT-ATP6P00846 226 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 LIMS3P0CW19 117 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 LIMS4P0CW20 117 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 HIST1H1CP16403 213 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 PRKCAP17252 672 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 GADD45AP24522 165 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 RPS5P46782 204 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 WNT4P56705 351 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 VBP1P61758 197 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 ROR2Q01974 943 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 TCF15Q12870 199 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 TSTQ16762 297 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 GXYLT1Q4G148 440 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 BICRALQ6AI39 1079 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR5M10Q6IEU7 315 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 OPN5Q6U736 354 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 SHFQ7M4L6 423 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 ATCAYQ86WG3 371 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 DND1Q8IYX4 353 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 ESX1Q8N693 406 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR52E2Q8NGJ4 325 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 MOSPD2Q8NHP6 518 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 STK35Q8TDR2 534 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 RPL3LQ92901 407 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 PTDSS2Q9BVG9 487 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 NDEL1Q9GZM8 345 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 CPNE5Q9HCH3 593 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 WDR70Q9NW82 654 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 HAO2Q9NYQ3 351 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 PPP4R1LQ9P1A2 415 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 NCDNQ9UBB6 729 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 TNFRSF10DQ9UBN6 386 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 ADAM18Q9Y3Q7 739 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 C2orf72A6NCS6 295 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 BLOC1S5-TXNDC5H3BN57 136 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 IMPA2O14732 288 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 WISP1O95388 367 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 CD14P08571 375 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 ICAM2P13598 275 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 TGM1P22735 817 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 AQP2P41181 271 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 CASP3P42574 277 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 LIMK1P53667 647 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 RPS18P62269 152 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 RPS15P62841 145 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 SNTA1Q13424 505 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 SSX1Q16384 188 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 ALG10Q5BKT4 473 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 POMZP3Q6PJE2 187 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 NANOGNBQ7Z5D8 188 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 SIRT6Q8N6T7 355 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 FAM98AQ8NCA5 519 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 SECISBP2Q96T21 854 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 TEAD3Q99594 435 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 ZNF649Q9BS31 505 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 KATNB1Q9BVA0 655 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 ISYNA1Q9NPH2 558 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 MED11Q9P086 117 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 CHCHD2Q9Y6H1 151 aaPredicted RBP10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 OTOGLQ3ZCN5 2332 aa10.38□□□□□ -0.75
SMARCAL1-203ENST00000392128 ZC3H12DA2A288 527 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 HPP00738 406 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 HIST1H2ABP04908 130 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 ATP6V1E1P36543 226 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 APOBEC1P41238 236 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 NCS1P62166 190 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 LSM3P62310 102 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 RPL18Q07020 188 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 TIMM50Q3ZCQ8 353 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 KLHL12Q53G59 568 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 FAM69AQ5T7M9 428 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 HIST3H2AQ7L7L0 130 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 FAM122BQ7Z309 247 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 CYB561A3Q8NBI2 242 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 ZNF485Q8NCK3 441 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 SDR9C7Q8NEX9 313 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR51G2Q8NGK0 314 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR6S1Q8NH40 331 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR4K13Q8NH42 304 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 NDNFQ8TB73 568 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 HIST1H2ACQ93077 130 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 FRMD6Q96NE9 622 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 DDOQ99489 341 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 FAM117AQ9C073 453 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 B3GNT4Q9C0J1 378 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 C21orf140B9A014 251 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 TXNDC12O95881 172 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 OTX2P32243 289 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms