RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ZP3P21754 424 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 FOXRED1Q96CU9 486 aaPredicted RBP13.22□□□□□ -0.29
RTF1-201ENST00000389629 DLL4Q9NR61 685 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 GPR34Q9UPC5 381 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 ZNF281Q9Y2X9 895 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 ATG4BQ9Y4P1 393 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 WDPCPO95876 746 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 EGFP01133 1207 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 ITGA5P08648 1049 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 PET100P0DJ07 73 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 IL12BP29460 328 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 DECR1Q16698 335 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 GPR32P1Q8NGA4 272 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 TEAD3Q99594 435 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 C12orf10Q9HB07 376 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 FZD3Q9NPG1 666 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 KIF25Q9UIL4 384 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 OR6C65A6NJZ3 312 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 SOX1O00570 391 aaPredicted RBP13.21□□□□□ -0.29
RTF1-201ENST00000389629 MAKP20794 623 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 ACHEP22303 614 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 PDX1P52945 283 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 TRA2BP62995 288 aaKnown RBP13.21□□□□□ -0.29
RTF1-201ENST00000389629 S100A12P80511 92 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 PRDX1Q06830 199 aaKnown RBP13.21□□□□□ -0.29
RTF1-201ENST00000389629 FAM122BQ7Z309 247 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 SAMD11Q96NU1 681 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 NXF2Q9GZY0 626 aaKnown RBP13.21□□□□□ -0.29
RTF1-201ENST00000389629 GPR89AB7ZAQ6 455 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 SCDO00767 359 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 KAT7O95251 611 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 CHRM4P08173 479 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 GPR89BP0CG08 455 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 UBE2IP63279 158 aaKnown RBP13.21□□□□□ -0.29
RTF1-201ENST00000389629 SHC2P98077 582 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 ALG11Q2TAA5 492 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 SFRP5Q5T4F7 317 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 MRPL2Q5T653 305 aaKnown RBP13.21□□□□□ -0.29
RTF1-201ENST00000389629 CAMKMTQ7Z624 323 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 CMTM4Q8IZR5 234 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 SLC39A11Q8N1S5 342 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 ZNF619Q8N2I2 560 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 ANKRD53Q8N9V6 530 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 PTCHD1Q96NR3 888 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 DGAT2Q96PD7 388 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 PNO1Q9NRX1 252 aaKnown RBP13.21□□□□□ -0.29
RTF1-201ENST00000389629 TM7SF3Q9NS93 570 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 FBXL21Q9UKT6 434 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 TMEM14AQ9Y6G1 99 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 TRIM64BA6NI03 449 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 KIAA0355O15063 1070 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 LDB3O75112 727 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 LIMS3P0CW19 117 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 LIMS4P0CW20 117 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 IFNGR1P15260 489 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 SRMP19623 302 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 TUBG1P23258 451 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 DCTDP32321 178 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 CAMLGP49069 296 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 HMGA2P52926 109 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 RBM39Q14498 530 aaKnown RBP13.21□□□□□ -0.29
RTF1-201ENST00000389629 GLYR1Q49A26 553 aaPredicted RBP13.21□□□□□ -0.29
RTF1-201ENST00000389629 C1orf94Q6P1W5 598 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 NUP54Q7Z3B4 507 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 ADGRG3Q86Y34 549 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 ZNF417Q8TAU3 575 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 SLC22A8Q8TCC7 542 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 ABHD1Q96SE0 405 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 IFT22Q9H7X7 185 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 ZNF304Q9HCX3 659 aa13.21□□□□□ -0.29
RTF1-201ENST00000389629 GGT3PA6NGU5 568 aa13.21□□□□□ -0.3
RTF1-201ENST00000389629 GPR143P51810 404 aa13.21□□□□□ -0.3
RTF1-201ENST00000389629 TOMM20Q15388 145 aa13.21□□□□□ -0.3
RTF1-201ENST00000389629 KCTD18Q6PI47 426 aaPredicted RBP13.21□□□□□ -0.3
RTF1-201ENST00000389629 OR51D1Q8NGF3 324 aa13.21□□□□□ -0.3
RTF1-201ENST00000389629 DERL3Q96Q80 235 aa13.21□□□□□ -0.3
RTF1-201ENST00000389629 FGF20Q9NP95 211 aaPredicted RBP13.21□□□□□ -0.3
RTF1-201ENST00000389629 RBBP6Q7Z6E9 1792 aaKnown RBP13.21□□□□□ -0.3
RTF1-201ENST00000389629 A0A0A6YYH2 397 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 TMEM72A0PK05 275 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 A6NJ64 397 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 ABLIM3O94929 683 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 KNG1P01042 644 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 GXYLT1Q4G148 440 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 Q5BKY6 102 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 GPR139Q6DWJ6 353 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 WDSUB1Q8N9V3 476 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 SLC16A11Q8NCK7 471 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 OR5K2Q8NHB8 316 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 GOT1L1Q8NHS2 421 aaPredicted RBP13.2□□□□□ -0.3
RTF1-201ENST00000389629 CXorf58Q96LI9 332 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 TBL1XR1Q9BZK7 514 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 ZNF701Q9NV72 531 aaPredicted RBP13.2□□□□□ -0.3
RTF1-201ENST00000389629 CBX7O95931 251 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 WNT1P04628 370 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 SBK2P0C263 348 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 RRASP10301 218 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 MAOAP21397 527 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 CD79BP40259 229 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms