RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ASF1BQ9NVP2 202 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 C5AR2Q9P296 337 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 GHRLQ9UBU3 117 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 OR6C76A6NM76 312 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 LINC00271P0C7V0 271 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 NFYBP25208 207 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 PPP2CBP62714 309 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 PPP2CAP67775 309 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 MRPS10P82664 201 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 SRSF3P84103 164 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 SMCO1Q147U7 214 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 PRPF38BQ5VTL8 546 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 ASTLQ6HA08 431 aaPredicted RBP13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 TMEM71Q6P5X7 295 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 TMEM25Q86YD3 366 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 NRMQ8IXM6 262 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 C1orf216Q8TAB5 229 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 TMEM138Q9NPI0 162 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 LRIT2A6NDA9 550 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 ACOT7O00154 380 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 LEFTY2O00292 366 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 BCL2L11O43521 198 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 SOCS5O75159 536 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 ACTL6AO96019 429 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 CATP04040 527 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 MRPL3P09001 348 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 ABOP16442 354 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 HTR2AP28223 471 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 AGTR1P30556 359 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 HCCSP53701 268 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 PSMD4P55036 377 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 ST3GAL3Q11203 375 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 POM121L1PQ3SYA9 428 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 C9orf50Q5SZB4 431 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 TPRG1Q6ZUI0 275 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 ARL6IP6Q8N6S5 226 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 ACOT11Q8WXI4 607 aaPredicted RBP13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 GFI1Q99684 422 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 TCEAL7Q9BRU2 100 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 PINK1Q9BXM7 581 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 NRIP3Q9NQ35 241 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 PRMT8Q9NR22 394 aaPredicted RBP13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 GPR55Q9Y2T6 319 aaPredicted RBP13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 INSL6Q9Y581 213 aa13.5□□□□□ -0.25
VPS9D1-201ENST00000389386 OR14I1A6ND48 311 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 HIDE1A8MVS5 230 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 CDC42EP2O14613 210 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 ZGLP1P0C6A0 271 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 TRHRP34981 398 aaPredicted RBP13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 ARFIP1P53367 373 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 PNLIPRP2P54317 469 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 RPS11P62280 158 aaKnown RBP eCLIP13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 DECR1Q16698 335 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 EIF2S3LQ2VIR3 472 aaKnown RBP13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 RNF212Q495C1 297 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 TMEM69Q5SWH9 247 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 NAA40Q86UY6 237 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 LMNTD1Q8N9Z9 388 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF740Q8NDX6 193 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 S100A16Q96FQ6 103 aaKnown RBP13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 TEAD3Q99594 435 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 ZDHHC6Q9H6R6 413 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 CERS4Q9HA82 394 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 HCFC2Q9Y5Z7 792 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 A0A1B0GTQ1 180 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 RPS15P62841 145 aaKnown RBP13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 RELQ04864 619 aaPredicted RBP13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 ACER2Q5QJU3 275 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 STPG1Q5TH74 334 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF813Q6ZN06 617 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 TM4SF18Q96CE8 201 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 SLC35G5Q96KT7 338 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 SPOCK3Q9BQ16 436 aa13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF471Q9BX82 626 aaPredicted RBP13.49□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF729A6NN14 1252 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 IFITM5A6NNB3 132 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 SYT5O00445 386 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 OGG1O15527 345 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 TBX19O60806 448 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 LATS1O95835 1130 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 SBK2P0C263 348 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 DDX6P26196 483 aaKnown RBP eCLIP13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 CTNNB1P35222 781 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 FRKP42685 505 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 TBPL1P62380 186 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 FUT5Q11128 374 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 TSTA3Q13630 321 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF345Q14585 488 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 PEA15Q15121 130 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 LY6G6FQ5SQ64 297 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 PLPP4Q5VZY2 271 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 SZRD1Q7Z422 152 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 LILRA3Q8N6C8 439 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF480Q8WV37 535 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 SMPDL3BQ92485 455 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 NR4A3Q92570 626 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 OR14A2Q96R54 314 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF230Q9UIE0 474 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 SPTBN5Q9NRC6 3674 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms