RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 MRI1Q9BV20 369 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 COPS7AQ9UBW8 275 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 F5P12259 2224 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 PTHLHP12272 177 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 BSGP35613 385 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 GLYR1Q49A26 553 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 CLLU1Q5K131 121 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 VASNQ6EMK4 673 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF585AQ6P3V2 769 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 ABHD17CQ6PCB6 329 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 SVBPQ8N300 66 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR4Q3Q8NH05 313 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 GAL3ST3Q96A11 431 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 IL21RQ9HBE5 538 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 RBM7Q9Y580 266 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 KCNE3Q9Y6H6 103 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 A0A1B0GWA3 101 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 LRIT2A6NDA9 550 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 HYAL3O43820 417 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 SELENOFO60613 162 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 KAT7O95251 611 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 H2BFMP0C1H6 154 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 CPMP14384 443 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 IRS1P35568 1242 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 BCL6P41182 706 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 CST6Q15828 149 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF542PQ5EBM4 170 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC48A1Q6P1K1 146 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 TECPR1Q7Z6L1 1165 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR52R1Q8NGF1 315 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR51S1Q8NGJ8 323 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 ARRDC3Q96B67 414 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 C14orf166Q9Y224 244 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 M0QYG6 137 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 PVRP15151 417 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 S100A2P29034 98 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 RPS27AP62979 156 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 UBA52P62987 128 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 RPS21P63220 83 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 MFSD12Q6NUT3 480 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 DNM1P34Q6PK57 102 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF836Q6ZNA1 936 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 BPHLQ86WA6 291 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR1J4Q8NGS1 313 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZG16BQ96DA0 208 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 VRK1Q99986 396 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 ARPC5LQ9BPX5 153 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 BIN3Q9NQY0 253 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 REV1Q9UBZ9 1251 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 LY75O60449 1722 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 TRIM64BA6NI03 449 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 GABARAPH6UMI1 98 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 PEX12O00623 359 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 SGCEO43556 437 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 ABLIM3O94929 683 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 GIPP09681 153 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 CSF2RAP15509 400 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 PCBP3P57721 371 aaKnown RBP12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 PRPS1P60891 318 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 RAB2AP61019 212 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 DUSP5Q16690 384 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 NDUFAF7Q7L592 441 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 PNLDC1Q8NA58 520 aaKnown RBP12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR52B4Q8NGK2 314 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 S100PBPQ96BU1 408 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 NECAB3Q96P71 396 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 SERINC2Q96SA4 455 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 ALG12Q9BV10 488 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 PITHD1Q9GZP4 211 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 ANKRD19PQ9H560 264 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 MAN2C1Q9NTJ4 1040 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 DOK2O60496 412 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 DCTDP32321 178 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 CDK5Q00535 292 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 SPOCK1Q08629 439 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 EIF2B1Q14232 305 aaKnown RBP12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 FAM26DQ5JW98 314 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC35D2Q76EJ3 337 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 PLA2G15Q8NCC3 412 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC35A4Q96G79 324 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC25A44Q96H78 314 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 ULBP3Q9BZM4 244 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC6A20Q9NP91 592 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 FAM74A1Q5RGS3 127 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 TMEM201Q5SNT2 666 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 C9orf62Q8N4C0 152 aa12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 PELOQ9BRX2 385 aaKnown RBP12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF701Q9NV72 531 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-201ENST00000389328 SRPX2O60687 465 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 RDH16O75452 317 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 AGERQ15109 404 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 TCEAL5Q5H9L2 206 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC18B1Q6NT16 456 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 DPY19L4Q7Z388 723 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 MFSD8Q8NHS3 518 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 MICU1Q9BPX6 476 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 RPS10P5Q9NQ39 176 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 NCDNQ9UBB6 729 aa12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 TESQ9UGI8 421 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-201ENST00000389328 CCSO14618 274 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms