RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 DEF8Q6ZN54 512 aa17.3■□□□□ 0.36
GTF3A-201ENST00000381140 FAM214BQ7L5A3 538 aa17.3■□□□□ 0.36
GTF3A-201ENST00000381140 P3H2Q8IVL5 708 aa17.3■□□□□ 0.36
GTF3A-201ENST00000381140 SLC47A1Q96FL8 570 aa17.3■□□□□ 0.36
GTF3A-201ENST00000381140 LRRC46Q96FV0 321 aa17.3■□□□□ 0.36
GTF3A-201ENST00000381140 OPN3Q9H1Y3 402 aaPredicted RBP17.3■□□□□ 0.36
GTF3A-201ENST00000381140 PIGMQ9H3S5 423 aa17.3■□□□□ 0.36
GTF3A-201ENST00000381140 C12orf49Q9H741 205 aa17.3■□□□□ 0.36
GTF3A-201ENST00000381140 ADPRHL2Q9NX46 363 aa17.3■□□□□ 0.36
GTF3A-201ENST00000381140 TMEM229AB2RXF0 380 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 SS18L1O75177 396 aaPredicted RBP17.29■□□□□ 0.36
GTF3A-201ENST00000381140 PRKD3O94806 890 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 AHSA1O95433 338 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 GPIP06744 558 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 PNMTP11086 282 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 CDH12P55289 794 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 SLC35A1P78382 337 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 RASGEF1BQ0VAM2 473 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 FOXD4Q12950 439 aaPredicted RBP17.29■□□□□ 0.36
GTF3A-201ENST00000381140 SNTB1Q13884 538 aaKnown RBP17.29■□□□□ 0.36
GTF3A-201ENST00000381140 RCN1Q15293 331 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 TMEM201Q5SNT2 666 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 EEF1A1P5Q5VTE0 462 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 C1orf140Q5VVS0 124 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 MEX3BQ6ZN04 569 aaKnown RBP17.29■□□□□ 0.36
GTF3A-201ENST00000381140 PYDC1Q8WXC3 89 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 LZICQ8WZA0 190 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 ZNF775Q96BV0 537 aaPredicted RBP17.29■□□□□ 0.36
GTF3A-201ENST00000381140 STARD4Q96DR4 205 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 TAPBPLQ9BX59 468 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 POTEKPQ9BYX7 375 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 KLHL13Q9P2N7 655 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 PROCRQ9UNN8 238 aa17.29■□□□□ 0.36
GTF3A-201ENST00000381140 A0A0B4J2E0 115 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 A0A1B0GX12 115 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 DHRS12A0PJE2 317 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 H3BNX3 289 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 SERPINA1P01009 418 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 COX6B1P14854 86 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 AGTR1P30556 359 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 RPS5P46782 204 aaKnown RBP17.28■□□□□ 0.36
GTF3A-201ENST00000381140 CCDC103Q8IW40 242 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 TUSC5Q8IXB3 177 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 ADGRG5Q8IZF4 528 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 SLC43A2Q8N370 569 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 SLC25A36Q96CQ1 311 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 RBM24Q9BX46 236 aaKnown RBP17.28■□□□□ 0.36
GTF3A-201ENST00000381140 GLRX2Q9NS18 164 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 DCAF13Q9NV06 445 aaKnown RBP17.28■□□□□ 0.36
GTF3A-201ENST00000381140 STX18Q9P2W9 335 aaKnown RBP17.28■□□□□ 0.36
GTF3A-201ENST00000381140 TRAPPC4Q9Y296 219 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 LIPT2A6NK58 231 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 CYTIPO60759 359 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 FMO6PO60774 539 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 SELENOWP63302 87 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 GUSBP1Q15486 140 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 ZNF613Q6PF04 617 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 VTCN1Q7Z7D3 282 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 OR6K3Q8NGY3 331 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 STK35Q8TDR2 534 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 ADAMTS16Q8TE57 1224 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 RNASE6Q93091 150 aaKnown RBP17.28■□□□□ 0.36
GTF3A-201ENST00000381140 SLC38A4Q969I6 547 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 KTI12Q96EK9 354 aaPredicted RBP17.28■□□□□ 0.36
GTF3A-201ENST00000381140 ZNF300Q96RE9 604 aaPredicted RBP17.28■□□□□ 0.36
GTF3A-201ENST00000381140 NAA11Q9BSU3 229 aaPredicted RBP17.28■□□□□ 0.36
GTF3A-201ENST00000381140 C12orf10Q9HB07 376 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 CCM2LQ9NUG4 571 aaPredicted RBP17.28■□□□□ 0.36
GTF3A-201ENST00000381140 KLHL9Q9P2J3 617 aa17.28■□□□□ 0.36
GTF3A-201ENST00000381140 TRAPPC13A5PLN9 417 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 ZNF814B7Z6K7 855 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 RAMP1O60894 148 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 AKR7A3O95154 331 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 HOXB6P17509 224 aaKnown RBP17.27■□□□□ 0.35
GTF3A-201ENST00000381140 TAS2R41P59536 307 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 EGR4Q05215 589 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 EXOC3L2Q2M3D2 409 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 OTUD3Q5T2D3 398 aaPredicted RBP17.27■□□□□ 0.35
GTF3A-201ENST00000381140 FKBP9P1Q75LS8 142 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 NUFIP2Q7Z417 695 aaKnown RBP17.27■□□□□ 0.35
GTF3A-201ENST00000381140 TSPYL5Q86VY4 417 aaPredicted RBP17.27■□□□□ 0.35
GTF3A-201ENST00000381140 ZNF610Q8N9Z0 462 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 PAPD5Q8NDF8 572 aaKnown RBP17.27■□□□□ 0.35
GTF3A-201ENST00000381140 PIGXQ8TBF5 258 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 CANT1Q8WVQ1 401 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 SLCO4A1Q96BD0 722 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 PSD2Q9BQI7 771 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 ARMC1Q9NVT9 282 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 GALNT8Q9NY28 637 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 JKAMPQ9P055 326 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 RPS6KA6Q9UK32 745 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 SLC7A7Q9UM01 511 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 SAMD4AQ9UPU9 718 aaKnown RBP17.27■□□□□ 0.35
GTF3A-201ENST00000381140 V9GYQ6 96 aa17.27■□□□□ 0.35
GTF3A-201ENST00000381140 CACNA1DQ01668 2161 aa17.26■□□□□ 0.35
GTF3A-201ENST00000381140 IGKV1D-42A0A075B6H8 117 aa17.26■□□□□ 0.35
GTF3A-201ENST00000381140 A0A087WUJ7 227 aa17.26■□□□□ 0.35
GTF3A-201ENST00000381140 MSTNO14793 375 aa17.26■□□□□ 0.35
GTF3A-201ENST00000381140 DNPH1O43598 174 aa17.26■□□□□ 0.35
GTF3A-201ENST00000381140 EIF1BO60739 113 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms