RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 DUSP23Q9BVJ7 150 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 YIPF2Q9BWQ6 316 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 RNF32Q9H0A6 362 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 NRIP3Q9NQ35 241 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 ZMIZ1Q9ULJ6 1067 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 CLCA3PQ9Y6N3 262 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 ASCC3Q8N3C0 2202 aaKnown RBP19.68■□□□□ 0.74
TRIM54-202ENST00000380075 C2orf92A0A1B0GVN3 265 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 SHISA3A0PJX4 238 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 MCIDASD6RGH6 385 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 HYAL3O43820 417 aaPredicted RBP19.68■□□□□ 0.74
TRIM54-202ENST00000380075 IGKV3-11P04433 115 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 CSF3P09919 207 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 IMPDH2P12268 514 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 RPL4P36578 427 aaKnown RBP19.68■□□□□ 0.74
TRIM54-202ENST00000380075 CAV3P56539 151 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 SKP2Q13309 424 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 IL10RAQ13651 578 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 YOD1Q5VVQ6 348 aaPredicted RBP19.68■□□□□ 0.74
TRIM54-202ENST00000380075 NUP54Q7Z3B4 507 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 NRARPQ7Z6K4 114 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 KMT5CQ86Y97 462 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 D2HGDHQ8N465 521 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 SDR9C7Q8NEX9 313 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 OR4K13Q8NH42 304 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 C12orf10Q9HB07 376 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 FBXL4Q9UKA2 621 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 SMIM30A4D0T7 59 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 J3QLW9 94 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 GNB5O14775 395 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 ZNF19P17023 458 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 ALAS2P22557 587 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 MYL9P24844 172 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 EVX1P49640 407 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 TPTEP56180 551 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 KCNAB1Q14722 419 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 PON3Q15166 354 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 DMKNQ6E0U4 476 aaPredicted RBP19.67■□□□□ 0.74
TRIM54-202ENST00000380075 ARL9Q6T311 187 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 ATG4DQ86TL0 474 aaPredicted RBP19.67■□□□□ 0.74
TRIM54-202ENST00000380075 GPR135Q8IZ08 494 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 PHOSPHO1Q8TCT1 267 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 NXF5Q9H1B4 397 aaKnown RBP19.67■□□□□ 0.74
TRIM54-202ENST00000380075 PAIP2BQ9ULR5 123 aaKnown RBP19.67■□□□□ 0.74
TRIM54-202ENST00000380075 SLC6A5Q9Y345 797 aa19.67■□□□□ 0.74
TRIM54-202ENST00000380075 ZNF264O43296 627 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 UTS2O95399 124 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 SERPINA3P01011 423 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 HLA-DQB1P01920 261 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 APEHP13798 732 aaKnown RBP19.66■□□□□ 0.74
TRIM54-202ENST00000380075 GLB1P16278 677 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 OR1D4P47884 311 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 SLC6A8P48029 635 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 NRG3P56975 720 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 OR1D5P58170 312 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 SELENBP1Q13228 472 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 AGAP6Q5VW22 663 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 HBMQ6B0K9 141 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 CNIH2Q6PI25 160 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 PAMR1Q6UXH9 720 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 SLC35F3Q8IY50 421 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 TEX19Q8NA77 164 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 AGAP4Q96P64 663 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 PPP1R3EQ9H7J1 279 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 ARID1BQ8NFD5 2236 aaPredicted RBP19.66■□□□□ 0.74
TRIM54-202ENST00000380075 IGKV1D-42A0A075B6H8 117 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 HPGDSO60760 199 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 SC5DO75845 299 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 CD1AP06126 327 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 CASP3P42574 277 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 RFX2P48378 723 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 DIO1P49895 249 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 INSL4Q14641 139 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 CD226Q15762 336 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 PRSS42Q7Z5A4 293 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 CELF2-AS1Q8N7Q2 184 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 OR14A16Q8NHC5 309 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 ZNF721Q8TF20 911 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 ADIPOR1Q96A54 375 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 SLC41A2Q96JW4 573 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 OR8D2Q9GZM6 311 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 NDEL1Q9GZM8 345 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 PIEZO1Q92508 2521 aa19.66■□□□□ 0.74
TRIM54-202ENST00000380075 LY6G6EA0A0G2JKS1 128 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 TCRBV16S1A1N1A0A5B0 115 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 DDAH2O95865 285 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 GYPBP06028 91 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 FBLP22087 321 aaKnown RBP19.65■□□□□ 0.74
TRIM54-202ENST00000380075 OR2B6P58173 313 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 OR12D2P58182 307 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 HSF2Q03933 536 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 ZNF544Q6NX49 715 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 PXKQ7Z7A4 578 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 PIP4P1Q86T03 277 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 RAB43Q86YS6 212 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 LRRC17Q8N6Y2 441 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 NPEPL1Q8NDH3 523 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 OR1L3Q8NH93 324 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 ABHD4Q8TB40 342 aa19.65■□□□□ 0.74
TRIM54-202ENST00000380075 DAZLQ92904 295 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms