RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 DHCR7Q9UBM7 475 aaKnown RBP7.06□□□□□ -1.28
CDKL5-202ENST00000379996 ZNF221Q9UK13 617 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 C19orf53Q9UNZ5 99 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-202ENST00000379996 RBMX2Q9Y388 322 aaKnown RBP7.06□□□□□ -1.28
CDKL5-202ENST00000379996 SPIN1Q9Y657 262 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-202ENST00000379996 WDFY4Q6ZS81 3184 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 FRS3O43559 492 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 HCN1O60741 890 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 SLC2A10O95528 541 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 CLPSP04118 112 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 S1PR1P21453 382 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 TNK1Q13470 666 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 ELAVL1Q15717 326 aaKnown RBP7.06□□□□□ -1.28
CDKL5-202ENST00000379996 NDUFA5Q16718 116 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 SPDYE7PQ495Y7 208 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 TIGD3Q6B0B8 471 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 SMARCD3Q6STE5 483 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 SEZ6L2Q6UXD5 910 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 OR14A16Q8NHC5 309 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 RPS4Y2Q8TD47 263 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 SLC9A6Q92581 669 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 PMM1Q92871 262 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 PEX11GQ96HA9 241 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 YIPF4Q9BSR8 244 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 LMF2Q9BU23 707 aaKnown RBP7.06□□□□□ -1.28
CDKL5-202ENST00000379996 ACTRT3Q9BYD9 372 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 ENKD1Q9H0I2 346 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 TIGARQ9NQ88 270 aa7.06□□□□□ -1.28
CDKL5-202ENST00000379996 HINT3Q9NQE9 182 aaKnown RBP7.06□□□□□ -1.28
CDKL5-202ENST00000379996 GABRPO00591 440 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 TPD52L2O43399 206 aaKnown RBP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 KLF7O75840 302 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 APOL3O95236 402 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 EFNA3P52797 238 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 CLDN20P56880 219 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 PPP3R1P63098 170 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 DUSP8Q13202 625 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 C1DQ13901 141 aaKnown RBP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 GNA13Q14344 377 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 NIPAL3Q6P499 406 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 SHFQ7M4L6 423 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 NUP43Q8NFH3 380 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 OR4F15Q8NGB8 312 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 OR9Q1Q8NGQ5 310 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 OR2Y1Q8NGV0 311 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 OR8K3Q8NH51 312 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 UFD1Q92890 307 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ART5Q96L15 291 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 MARVELD1Q9BSK0 173 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 SLC22A4Q9H015 551 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ZNF700Q9H0M5 742 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ZCCHC4Q9H5U6 513 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ACOXLQ9NUZ1 547 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 MAT2BQ9NZL9 334 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 CDH10Q9Y6N8 788 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 STMND1H3BQB6 276 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 IGKV3-11P04433 115 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ALAS2P22557 587 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 CAV3P56539 151 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 MAT1AQ00266 395 aaKnown RBP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 IKZF1Q13422 519 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 GPAT3Q53EU6 434 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ZNF311Q5JNZ3 666 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 RAB43Q86YS6 212 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ATP6V1C2Q8NEY4 427 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 TOR1AIP2Q8NFQ8 470 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 LILRB4Q8NHJ6 448 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 STT3BQ8TCJ2 826 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 HAVCR2Q8TDQ0 301 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 THAP3Q8WTV1 239 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 PGLYRP3Q96LB9 341 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 MS4A4EQ96PG1 132 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 STACQ99469 402 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 HCAR1Q9BXC0 346 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 VN1R1Q9GZP7 353 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 RNF121Q9H920 327 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ISG20L2Q9H9L3 353 aaKnown RBP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 FOXJ2Q9P0K8 574 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 A0A0G2JMP0 313 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ZNF860A6NHJ4 632 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 CPSF4LA6NMK7 179 aaKnown RBP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 C9J4A7 227 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 BRINP1O60477 761 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 RGS9O75916 674 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 AGR2O95994 175 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 APEX1P27695 318 aaKnown RBP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 LCN1P31025 176 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 OR1D4P47884 311 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 PRR5P85299 388 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 MXD1Q05195 221 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 SNAPC1Q16533 368 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 MAPK14Q16539 360 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 LAMTOR1Q6IAA8 161 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 SLC30A6Q6NXT4 461 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ANKRD37Q7Z713 158 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 GLCCI1Q86VQ1 547 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 THNSL2Q86YJ6 484 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 CMIPQ8IY22 773 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 SLC16A11Q8NCK7 471 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms