RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 DKKL1Q9UK85 242 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 BOLA1Q9Y3E2 137 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 B3GALT1Q9Y5Z6 326 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 A0A1B0GX78 115 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 E9PI62 339 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 SSX4O60224 188 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 KHDRBS3O75525 346 aaKnown RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 DCKP27707 260 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 AP2S1P53680 142 aaPredicted RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 CTBP2P56545 445 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 E2F1Q01094 437 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 CBLBQ13191 982 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 COL28A1Q2UY09 1125 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 TMPRSS7Q7RTY8 843 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ASB15Q8WXK1 588 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 SLC7A6Q92536 515 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ANKRD9Q96BM1 317 aaPredicted RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 NXPE2Q96DL1 559 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 TUBA1CQ9BQE3 449 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 CDCP1Q9H5V8 836 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 LDAHQ9H6V9 325 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ACOXLQ9NUZ1 547 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 HPF1Q9NWY4 346 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 NLKQ9UBE8 527 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 FARSAQ9Y285 508 aaKnown RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 CHST2Q9Y4C5 530 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 NSG1A0A0A6YYJ2 146 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 CDHR4A6H8M9 788 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 SHISA7A6NL88 538 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF726A6NNF4 738 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 M0R082 166 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 SLC22A1O15245 554 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 IL33O95760 270 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 PATE4P0C8F1 98 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 CDAP32320 146 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 RORCP51449 518 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 DCDP81605 110 aaKnown RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 PRICKLE4Q2TBC4 344 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 OR10K2Q6IF99 312 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 FAAP20Q6NZ36 180 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 PRSS45Q7RTY3 260 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 C1orf216Q8TAB5 229 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF417Q8TAU3 575 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 TBC1D15Q8TC07 691 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 HSD17B8Q92506 261 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ARL5BQ96KC2 179 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF587Q96SQ5 575 aaPredicted RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 MRPL39Q9NYK5 338 aaKnown RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ENPP5Q9UJA9 477 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 FREM1Q5H8C1 2179 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 SPAARA0A1B0GVQ0 90 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 SLC33A1O00400 549 aaPredicted RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 CYR61O00622 381 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 NDUFB2O95178 105 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 AGR2O95994 175 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 RENP00797 406 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF28P17035 718 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 SLC15A1P46059 708 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 SCN1BQ07699 218 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 YOD1Q5VVQ6 348 aaPredicted RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 PLET1Q6UQ28 207 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 APOOLQ6UXV4 268 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 USP43Q70EL4 1123 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF550Q7Z398 422 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 C1orf210Q8IVY1 113 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 TIGD4Q8IY51 512 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 AGBL5Q8NDL9 886 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 TRMT10AQ8TBZ6 339 aaKnown RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ASB12Q8WXK4 309 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 METTL2AQ96IZ6 378 aaKnown RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 LCORQ96JN0 433 aaPredicted RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF681Q96N22 645 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 DUSP15Q9H1R2 295 aaPredicted RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 NEK6Q9HC98 313 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 ZSCAN32Q9NX65 697 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 PILRAQ9UKJ1 303 aa7.42□□□□□ -1.22
CKAP2-203ENST00000378037 MRPS18BQ9Y676 258 aaKnown RBP7.42□□□□□ -1.22
CKAP2-203ENST00000378037 SOBPA7XYQ1 873 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 PRODHO43272 600 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 SUSD5O60279 629 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 TRIM3O75382 744 aaPredicted RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 CCNKO75909 580 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 OXSR1O95747 527 aaPredicted RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 SLC1A3P43003 542 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 WNT4P56705 351 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 EEF1A1P68104 462 aaKnown RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 SPOCK1Q08629 439 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 P2RY14Q15391 338 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 C3AR1Q16581 482 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 ULK3Q6PHR2 472 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 NPSR1Q6W5P4 371 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 TRILQ7L0X0 811 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 TMED4Q7Z7H5 227 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 BHLHE23Q8NDY6 225 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 PITX2Q99697 317 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 IRF2BPLQ9H1B7 796 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 PLEKHA1Q9HB21 404 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 TRIM36Q9NQ86 728 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 ADAM29Q9UKF5 820 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 FBXL3Q9UKT7 428 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms