RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 OR9K2Q8NGE7 335 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 OR52E4Q8NGH9 312 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 DNAJA4Q8WW22 397 aaPredicted RBP14.86□□□□□ -0.03
HMGN4-201ENST00000377575 TMEM45BQ96B21 275 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 MUCL1Q96DR8 90 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 TRIM2Q9C040 744 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 TAS2R16Q9NYV7 291 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 SELENONQ9NZV5 590 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 VPS13CQ709C8 3753 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 CCT8L1PA6NM43 557 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 BBIP1A8MTZ0 92 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 SMPD2O60906 423 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 VAMP5O95183 116 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 CD3EP07766 207 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 PNMTP11086 282 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 GUCY1A3Q02108 690 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 CYLC2Q14093 348 aaPredicted RBP14.85□□□□□ -0.03
HMGN4-201ENST00000377575 SELPLGQ14242 412 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 MMEL1Q495T6 779 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 COQ5Q5HYK3 327 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 ALG10BQ5I7T1 473 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 FAM91A1Q658Y4 838 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 NET1Q7Z628 596 aaPredicted RBP14.85□□□□□ -0.03
HMGN4-201ENST00000377575 RANBP3LQ86VV4 465 aaPredicted RBP14.85□□□□□ -0.03
HMGN4-201ENST00000377575 PTOV1Q86YD1 416 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 ZNF433Q8N7K0 673 aaPredicted RBP14.85□□□□□ -0.03
HMGN4-201ENST00000377575 MFSD8Q8NHS3 518 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 TMEM204Q9BSN7 226 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 CCDC134Q9H6E4 229 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 KAT8Q9H7Z6 458 aaKnown RBP14.85□□□□□ -0.03
HMGN4-201ENST00000377575 UPB1Q9UBR1 384 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 RNF115Q9Y4L5 304 aa14.85□□□□□ -0.03
HMGN4-201ENST00000377575 ZNF469Q96JG9 3925 aaPredicted RBP14.84□□□□□ -0.03
HMGN4-201ENST00000377575 A0A1B0GWA3 101 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 CIB4A0PJX0 185 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 HS3ST1O14792 307 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 TPST1O60507 370 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 RAD51DO75771 328 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 CD99P14209 185 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 HTR2AP28223 471 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 PCGF2P35227 344 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 PCBP3P57721 371 aaKnown RBP14.84□□□□□ -0.03
HMGN4-201ENST00000377575 FAPQ12884 760 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 GLIPR1L2Q4G1C9 344 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 NCMAPQ5T1S8 102 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 INTS11Q5TA45 600 aaKnown RBP14.84□□□□□ -0.03
HMGN4-201ENST00000377575 TMEM225Q6GV28 225 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 CGB2Q6NT52 195 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 ULK3Q6PHR2 472 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 COMTD1Q86VU5 262 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 LSRQ86X29 649 aaPredicted RBP14.84□□□□□ -0.03
HMGN4-201ENST00000377575 LRRC75A-AS1Q8N1F1 130 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 SLC38A4Q969I6 547 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 SH3GL1Q99961 368 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 TMEM27Q9HBJ8 222 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 RASD1Q9Y272 281 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 ROS1P08922 2347 aa14.84□□□□□ -0.03
HMGN4-201ENST00000377575 OR5H1A6NKK0 313 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 FBP2O00757 339 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 ARHGEF9O43307 516 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 OR2T1O43869 369 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 MFN2O95140 757 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 NPPAP01160 153 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 NTF4P34130 210 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 RPS5P46782 204 aaKnown RBP14.83□□□□□ -0.04
HMGN4-201ENST00000377575 ADAM8P78325 824 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 DMTNQ08495 405 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 KLF10Q13118 480 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 OR7E24Q6IFN5 339 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 AAED1Q7RTV5 226 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 ABHD12BQ7Z5M8 362 aaPredicted RBP14.83□□□□□ -0.04
HMGN4-201ENST00000377575 PATL1Q86TB9 770 aaKnown RBP14.83□□□□□ -0.04
HMGN4-201ENST00000377575 POMGNT2Q8NAT1 580 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 OR10A6Q8NH74 314 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 SLC47A1Q96FL8 570 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 PTDSS2Q9BVG9 487 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 TMUB1Q9BVT8 246 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 RSPO3Q9BXY4 272 aaPredicted RBP14.83□□□□□ -0.04
HMGN4-201ENST00000377575 SLCO5A1Q9H2Y9 848 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 SAR1AQ9NR31 198 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 KLHL14Q9P2G3 628 aa14.83□□□□□ -0.04
HMGN4-201ENST00000377575 FLNAP21333 2647 aaKnown RBP14.82□□□□□ -0.04
HMGN4-201ENST00000377575 ARID1AO14497 2285 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 A0A0B4J2E0 115 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 A0A1B0GX12 115 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 FTCDNL1E5RQL4 147 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 MRASO14807 208 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 CLOCKO15516 846 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 TMCC2O75069 709 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 PLAUP00749 431 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 C8BP07358 591 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 ITGA5P08648 1049 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 HOXC12P31275 282 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 P2RY4P51582 365 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 NKX6-1P78426 367 aaPredicted RBP14.82□□□□□ -0.04
HMGN4-201ENST00000377575 TGFBR3Q03167 851 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 EGR4Q05215 589 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 BSPH1Q075Z2 132 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 SWT1Q5T5J6 900 aaKnown RBP14.82□□□□□ -0.04
HMGN4-201ENST00000377575 FAM69AQ5T7M9 428 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms