RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 FANCMQ8IYD8 2048 aa23.18■■□□□ 1.3
C9orf40-201ENST00000376854 CTDSPLO15194 276 aa23.18■■□□□ 1.3
C9orf40-201ENST00000376854 SPI1P17947 270 aa23.18■■□□□ 1.3
C9orf40-201ENST00000376854 NPSR1Q6W5P4 371 aa23.18■■□□□ 1.3
C9orf40-201ENST00000376854 BTN2A1Q7KYR7 527 aa23.18■■□□□ 1.3
C9orf40-201ENST00000376854 ZNF687Q8N1G0 1237 aa23.18■■□□□ 1.3
C9orf40-201ENST00000376854 ZPLD1Q8TCW7 415 aa23.18■■□□□ 1.3
C9orf40-201ENST00000376854 GIMAP1Q8WWP7 306 aa23.18■■□□□ 1.3
C9orf40-201ENST00000376854 DACT3Q96B18 629 aaPredicted RBP23.18■■□□□ 1.3
C9orf40-201ENST00000376854 SPACA7Q96KW9 195 aa23.18■■□□□ 1.3
C9orf40-201ENST00000376854 TCEAL2Q9H3H9 227 aaPredicted RBP23.18■■□□□ 1.3
C9orf40-201ENST00000376854 NOS1APO75052 506 aaPredicted RBP23.17■■□□□ 1.3
C9orf40-201ENST00000376854 SYPP08247 313 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 SRMP19623 302 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 SDHBP21912 280 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 AKT2P31751 481 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 P2RX3P56373 397 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 YPEL5P62699 121 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 DYRK1AQ13627 763 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 NNATQ16517 81 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 UNQ9370/PRO34162Q6UXP9 181 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 CMTM4Q8IZR5 234 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 SLC37A2Q8TED4 501 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 ORAI1Q96D31 301 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 MRPL48Q96GC5 212 aaKnown RBP23.17■■□□□ 1.3
C9orf40-201ENST00000376854 UCKL1Q9NWZ5 548 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 A0A087WUJ7 227 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 OR6C68A6NDL8 312 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 NPIPB9F8W1W9 429 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 TGFBR3LH3BV60 316 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 GDNFP39905 211 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 RAG2P55895 527 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 STX4Q12846 297 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 ZBTB37Q5TC79 503 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 OOSP2Q86WS3 158 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 OR11H4Q8NGC9 324 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 HCN3Q9P1Z3 774 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 USP34Q70CQ2 3546 aa23.17■■□□□ 1.3
C9orf40-201ENST00000376854 GPRIN2O60269 458 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 PPM1BO75688 479 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 CDC123O75794 336 aaPredicted RBP23.16■■□□□ 1.3
C9orf40-201ENST00000376854 CSTAP01040 98 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 TNFP01375 233 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 ADRB1P08588 477 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 PER3P56645 1201 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 ERVK-25P63136 954 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 ST3GAL2Q16842 350 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 ZSWIM7Q19AV6 140 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 CMIPQ8IY22 773 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 FAM109AQ8N4B1 249 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 BEST4Q8NFU0 473 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 RPLP0P6Q8NHW5 317 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 GPBAR1Q8TDU6 330 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 RASD2Q96D21 266 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 MS4A3Q96HJ5 214 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 Q9N2J8 555 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 LRIT1Q9P2V4 623 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 ZNF337Q9Y3M9 751 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 PIN1P1O15428 100 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 ST6GAL1P15907 406 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 TPMTP51580 245 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 SLC35D3Q5M8T2 416 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 HES5Q5TA89 166 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 PHYHIPQ92561 330 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 CMTM3Q96MX0 182 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 DDOQ99489 341 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 G6PC3Q9BUM1 346 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 C2orf42Q9NWW7 574 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 PTTG3PQ9NZH4 202 aa23.16■■□□□ 1.3
C9orf40-201ENST00000376854 A0A0A6YYC8 382 aaPredicted RBP23.15■■□□□ 1.3
C9orf40-201ENST00000376854 EFCAB7A8K855 629 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 IDSB3KWA1 339 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 I3L1I5 382 aaPredicted RBP23.15■■□□□ 1.3
C9orf40-201ENST00000376854 ZNF593O00488 134 aaPredicted RBP23.15■■□□□ 1.3
C9orf40-201ENST00000376854 CELA2BP08218 269 aaPredicted RBP23.15■■□□□ 1.3
C9orf40-201ENST00000376854 TYRP1P17643 537 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 ZNF267Q14586 743 aaPredicted RBP23.15■■□□□ 1.3
C9orf40-201ENST00000376854 LINGO2Q7L985 606 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 OR13H1Q8NG92 308 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 OR56B4Q8NH76 319 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 TTC9Q92623 222 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 NMNAT2Q9BZQ4 307 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 SLC25A18Q9H1K4 315 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 B3GNT2Q9NY97 397 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 TRIOO75962 3097 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 ACOD1A6NK06 481 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 PSMD9O00233 223 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 GPR171O14626 319 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 ARPC3O15145 178 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 SERPINI2O75830 405 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 HTR4Q13639 388 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 ZNF542PQ5EBM4 170 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 OR4C3Q8NH37 302 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 GFI1Q99684 422 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 ACTR6Q9GZN1 396 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 DIABLOQ9NR28 239 aa23.15■■□□□ 1.3
C9orf40-201ENST00000376854 ANKRD61A6NGH8 418 aa23.14■■□□□ 1.3
C9orf40-201ENST00000376854 OR7A10O76100 309 aa23.14■■□□□ 1.3
C9orf40-201ENST00000376854 GRPRP30550 384 aa23.14■■□□□ 1.3
C9orf40-201ENST00000376854 PSMD4P55036 377 aaKnown RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms