RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 FIBINQ8TAL6 211 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 FUBP1Q96AE4 644 aaKnown RBP11.67□□□□□ -0.54
VPS13A-204ENST00000376634 RNF170Q96K19 258 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SLC6A20Q9NP91 592 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 A0A1W2PPH5 198 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SLC22A23A1A5C7 686 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 NSA2O95478 260 aaKnown RBP11.67□□□□□ -0.54
VPS13A-204ENST00000376634 CLDN1O95832 211 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 P2RY2P41231 377 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 RPS5P46782 204 aaKnown RBP11.67□□□□□ -0.54
VPS13A-204ENST00000376634 HNF4GQ14541 408 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 IL20RBQ6UXL0 311 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 HHIPQ96QV1 700 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 ENTPD2Q9Y5L3 495 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 STYXL1Q9Y6J8 313 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 COL6A6A6NMZ7 2263 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 POM121CA8CG34 1229 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 RAP2BP61225 183 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 CATR1Q13166 79 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 PIN1Q13526 163 aaPredicted RBP11.66□□□□□ -0.54
VPS13A-204ENST00000376634 RAB40ALP0C0E4 278 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 PSMB10P40306 273 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 TATDN3Q17R31 274 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 USP51Q70EK9 711 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 RAB40AQ8WXH6 277 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 CDS1Q92903 461 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 STARD5Q9NSY2 213 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 RASD1Q9Y272 281 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 CASP8AP2Q9UKL3 1982 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 J3QR89 54 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 LIPCP11150 499 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 BAXQ07812 192 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 EVA1AQ9H8M9 152 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 IL23AQ9NPF7 189 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 NKX6-3A6NJ46 265 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 MTCP1P56278 107 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 DBX2Q6ZNG2 339 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 SDR9C7Q8NEX9 313 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 OR56B1Q8NGI3 324 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 LINC01599Q8WXQ3 324 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 ZBTB8AQ96BR9 441 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 VPS25Q9BRG1 176 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 NOX3Q9HBY0 568 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 LDB3O75112 727 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 HOXB5P09067 269 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 CDK4P11802 303 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 IL34Q6ZMJ4 242 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 OR14A16Q8NHC5 309 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 EGLN3Q9H6Z9 239 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 WIF1Q9Y5W5 379 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 FOXD2O60548 495 aaPredicted RBP11.66□□□□□ -0.54
VPS13A-204ENST00000376634 FLI1Q01543 452 aaPredicted RBP11.66□□□□□ -0.54
VPS13A-204ENST00000376634 CDK5R2Q13319 367 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 IRF4Q15306 451 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 C15orf54Q8N8G6 183 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 OR11A1Q9GZK7 315 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 SAP130Q9H0E3 1048 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 BTNL2Q9UIR0 455 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 PLXNB2O15031 1838 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 KRBOX1C9JBD0 128 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 CNIH1O95406 144 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 GSTP1P09211 210 aaKnown RBP11.66□□□□□ -0.54
VPS13A-204ENST00000376634 POU3F1Q03052 451 aaPredicted RBP11.66□□□□□ -0.54
VPS13A-204ENST00000376634 GPR18Q14330 331 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 ACSM3Q53FZ2 586 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 TIGD3Q6B0B8 471 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 LETMD1Q6P1Q0 360 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 LCTLQ6UWM7 567 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 APCDD1Q8J025 514 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 C1QTNF2Q9BXJ5 285 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 TRAPPC2LQ9UL33 140 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 KCNK2O95069 426 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 HOXD11P31277 338 aaPredicted RBP11.66□□□□□ -0.54
VPS13A-204ENST00000376634 NUDT1P36639 197 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 CXADRP78310 365 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 GTF2H5Q6ZYL4 71 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 ZNF566Q969W8 418 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 SLC41A2Q96JW4 573 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 TMEM181Q9P2C4 612 aa11.66□□□□□ -0.54
VPS13A-204ENST00000376634 SLC43A1O75387 559 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 IGFBP1P08833 259 aaPredicted RBP11.65□□□□□ -0.54
VPS13A-204ENST00000376634 GABRA4P48169 554 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 RRADP55042 308 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 GPR19Q15760 415 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 LYSMD4Q5XG99 296 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 GIMAP1Q8WWP7 306 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 SDK2Q58EX2 2172 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 H3BMQ9 156 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 CSF2RAP15509 400 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 ELK1P19419 428 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 HOXD12P35452 270 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 ETV6P41212 452 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 SLC7A5P1Q8MH63 180 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 OR5AR1Q8NGP9 310 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 OR1S2Q8NGQ3 325 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 STT3BQ8TCJ2 826 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 NAT6Q93015 286 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 FAM234AQ9H0X4 552 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 ETV4P43268 484 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms