RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 SLC17A4Q9Y2C5 497 aa11.9□□□□□ -0.51
MSH5-204ENST00000375755 SLC6A5Q9Y345 797 aa11.9□□□□□ -0.51
MSH5-204ENST00000375755 AK6Q9Y3D8 172 aaKnown RBP11.9□□□□□ -0.51
MSH5-204ENST00000375755 HMSDA8MTL9 139 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 SPDEFO95238 335 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 THY1P04216 161 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 ATP1B1P05026 303 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 HMGN1P05114 100 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 ERGP11308 486 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 ERVK-25P63136 954 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 MAT1AQ00266 395 aaKnown RBP11.89□□□□□ -0.51
MSH5-204ENST00000375755 TRAM1Q15629 374 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 LCTLQ6UWM7 567 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 ENPP7Q6UWV6 458 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 C17orf64Q86WR6 236 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 VRK2Q86Y07 508 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 GID4Q8IVV7 300 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 OR5J2Q8NH18 312 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 ZNF671Q8TAW3 534 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 TMEM255BQ8WV15 326 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 OR1E3Q8WZA6 343 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 CAMK1GQ96NX5 476 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 AICDAQ9GZX7 198 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 PLEKHA1Q9HB21 404 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 MED11Q9P086 117 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 TBC1D29Q9UFV1 150 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 OPN4Q9UHM6 478 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 FBXL3Q9UKT7 428 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 SLCO1B1Q9Y6L6 691 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 SCN2AQ99250 2005 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 TCRBV21S2A2A0A5A6 115 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 F8W036 122 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 TMPRSS11DO60235 418 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 TBX19O60806 448 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 ZGLP1P0C6A0 271 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 H2BFSP57053 126 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 ST3GAL3Q11203 375 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 HEPHL1Q6MZM0 1159 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 TEX19Q8NA77 164 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 OR52E1Q8NGJ3 308 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 SUN3Q8TAQ9 357 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 FANK1Q8TC84 345 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 PNPLA2Q96AD5 504 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 FAM131CQ96AQ9 280 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 BMFQ96LC9 184 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 DERL3Q96Q80 235 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 GLIPR2Q9H4G4 154 aa11.89□□□□□ -0.51
MSH5-204ENST00000375755 CDHR4A6H8M9 788 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 FLRT2O43155 660 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 GLAP06280 429 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 PTHLHP12272 177 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 FUT1P19526 365 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 PEBP1P30086 187 aaKnown RBP11.88□□□□□ -0.51
MSH5-204ENST00000375755 SNRPNP63162 240 aaKnown RBP11.88□□□□□ -0.51
MSH5-204ENST00000375755 MC2RQ01718 297 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 DMKNQ6E0U4 476 aaPredicted RBP11.88□□□□□ -0.51
MSH5-204ENST00000375755 OR7E24Q6IFN5 339 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 PM20D2Q8IYS1 436 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 ACOT11Q8WXI4 607 aaPredicted RBP11.88□□□□□ -0.51
MSH5-204ENST00000375755 ENKD1Q9H0I2 346 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 LHX9Q9NQ69 397 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 AHSPQ9NZD4 102 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 ERVK-19Q9WJR5 959 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 SDK1Q7Z5N4 2213 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 TRAV1-2A0A0B4J238 106 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 C4orf51C9J302 202 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 PRSS44E7EML9 344 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 H7C2Y5 167 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 OR1F1O43749 312 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 KHDRBS3O75525 346 aaKnown RBP11.88□□□□□ -0.51
MSH5-204ENST00000375755 PRKRAO75569 313 aaKnown RBP11.88□□□□□ -0.51
MSH5-204ENST00000375755 PYCR1P32322 319 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 LASP1Q14847 261 aaKnown RBP11.88□□□□□ -0.51
MSH5-204ENST00000375755 CSRP2Q16527 193 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 ZNF542PQ5EBM4 170 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 ZNF311Q5JNZ3 666 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 KHDRBS2Q5VWX1 349 aaKnown RBP11.88□□□□□ -0.51
MSH5-204ENST00000375755 C18orf63Q68DL7 685 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 SERPINA12Q8IW75 414 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 PXT1Q8NFP0 134 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 BPIFCQ8NFQ6 507 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 SETD7Q8WTS6 366 aaKnown RBP11.88□□□□□ -0.51
MSH5-204ENST00000375755 ARHGDIGQ99819 225 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 GINS4Q9BRT9 223 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 TTTY10Q9BZA0 68 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 SEMA4CQ9C0C4 833 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 KLHL31Q9H511 634 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 KCNK7Q9Y2U2 307 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 PRSS38A1L453 326 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 NAP1L6A6NFF2 107 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 ITGA10O75578 1167 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 SNAPC5O75971 98 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 H2AFB1P0C5Y9 115 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 ZNF35P13682 527 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 TYRP1P17643 537 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 KHKP50053 298 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 SLC16A1P53985 500 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 S100A12P80511 92 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 ZNF85Q03923 595 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms