RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 FAM60AQ9NP50 221 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 SATB2Q9UPW6 733 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 HSPB11Q9Y547 144 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 hCG_1807616A0A1W2PRN6 198 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 ZNF593O00488 134 aaPredicted RBP16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 PRPH2P23942 346 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 SELENOVP59797 346 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 E2F1Q01094 437 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 FAM53BQ14153 422 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 TBRG1Q3YBR2 411 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 SLX4IPQ5VYV7 408 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 MCTS1Q9ULC4 181 aaKnown RBP16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 ADAM18Q9Y3Q7 739 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 ZC3H12DA2A288 527 aaKnown RBP16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 AGAP5A6NIR3 686 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 CD14P08571 375 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 MLLT11Q13015 90 aaPredicted RBP16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 RIMKLAQ8IXN7 391 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 OR7G1Q8NGA0 311 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 CPNE2Q96FN4 548 aaPredicted RBP16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 FANCFQ9NPI8 374 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 ASB4Q9Y574 426 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 SLC2A10O95528 541 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 MPIG6BO95866 241 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 IGHG1P01857 330 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 CDK4P11802 303 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 ZNF16P17020 682 aaPredicted RBP16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 GUSBP11Q6P575 273 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 NEDD4LQ96PU5 975 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 COLQQ9Y215 455 aaPredicted RBP16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 ERCC1P07992 297 aaPredicted RBP16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 CLDN17P56750 224 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 LINC00346Q8IVM7 164 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 ELP5Q8TE02 316 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 MUL1Q969V5 352 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 OR11A1Q9GZK7 315 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 POLHQ9Y253 713 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 RGPD4Q7Z3J3 1758 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 A0A1W2PQF6 199 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 MEN1O00255 615 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 CD63P08962 238 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 LIPAP38571 399 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 BIDP55957 195 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 CLDN12P56749 244 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 CCL7P80098 99 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 SPOCK1Q08629 439 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 SOWAHCQ53LP3 525 aaPredicted RBP16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 AWAT2Q6E213 333 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 KIAA1958Q8N8K9 716 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 ACOT12Q8WYK0 555 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 GHSRQ92847 366 aa16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 UTP23Q9BRU9 249 aaKnown RBP16.55■□□□□ 0.24
PTPDC1-202ENST00000375360 MEIS3P1A6NDR6 274 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 SPINT1O43278 529 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 LRRTM2O43300 516 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 SCGB1D2O95969 90 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 STOMP27105 288 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 MAB21L1Q13394 359 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 P2RY14Q15391 338 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 SLC35F3Q8IY50 421 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 OR2A5Q96R48 311 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 CHRDQ9H2X0 955 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 CTSFQ9UBX1 484 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 GOLGB1Q14789 3259 aaKnown RBP16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 APOC1P02654 83 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 RPS25P62851 125 aaKnown RBP16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 MALLQ13021 153 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 ZNF181Q2M3W8 571 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 OTPQ5XKR4 325 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 KLHDC8BQ8IXV7 354 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 CCDC54Q8NEL0 328 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 OR13F1Q8NGS4 319 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 SLC25A44Q96H78 314 aaPredicted RBP16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 SLC38A1Q9H2H9 487 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 ACACAQ13085 2346 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 VSTM5A8MXK1 200 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 XKRXQ6PP77 449 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 VN1R4Q7Z5H5 301 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 CLEC1BQ9P126 229 aa16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 BOKQ9UMX3 212 aaPredicted RBP16.54■□□□□ 0.24
PTPDC1-202ENST00000375360 TRAV36DV7A0A075B6V5 113 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 HPGDSO60760 199 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 BMP4P12644 408 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 SWI5Q1ZZU3 235 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 NXNL2Q5VZ03 156 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 MBOAT4Q96T53 435 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 RHNO1Q9BSD3 238 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 ZNF442Q9H7R0 627 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 SLAMF7Q9NQ25 335 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 SDK2Q58EX2 2172 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 A0A0X1KG70 313 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 GABRPO00591 440 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 PCSK6P29122 969 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 TNFSF8P32971 234 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 GLP1RP43220 463 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 PPICP45877 212 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 COL28A1Q2UY09 1125 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 FAM199XQ6PEV8 388 aaPredicted RBP16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 LRRC56Q8IYG6 542 aaPredicted RBP16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 PIAS4Q8N2W9 510 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms