RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 C17orf47Q8NEP4 570 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 OR5J2Q8NH18 312 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 GHSRQ92847 366 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 KLHDC7BQ96G42 594 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 PEX11GQ96HA9 241 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 GPX7Q96SL4 187 aaPredicted RBP12.78□□□□□ -0.36
HMGCL-203ENST00000374490 GTPBP2Q9BX10 602 aaKnown RBP12.78□□□□□ -0.36
HMGCL-203ENST00000374490 TCEAL2Q9H3H9 227 aaPredicted RBP12.78□□□□□ -0.36
HMGCL-203ENST00000374490 UCK1Q9HA47 277 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 CAPN10Q9HC96 672 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 FAM60AQ9NP50 221 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 KLHL1Q9NR64 748 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 PAQR5Q9NXK6 330 aaPredicted RBP12.78□□□□□ -0.36
HMGCL-203ENST00000374490 COPZ2Q9P299 210 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 IER3IP1Q9Y5U9 82 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 CACNG2Q9Y698 323 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 FANCMQ8IYD8 2048 aa12.78□□□□□ -0.36
HMGCL-203ENST00000374490 A0A0A6YYC8 382 aaPredicted RBP12.77□□□□□ -0.36
HMGCL-203ENST00000374490 SYNDIG1LA6NDD5 238 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 OR6C70A6NIJ9 312 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 I3L1I5 382 aaPredicted RBP12.77□□□□□ -0.36
HMGCL-203ENST00000374490 PDCD5O14737 125 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 FZD7O75084 574 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 DHFRP00374 187 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 UCHL1P09936 223 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 CLUP10909 449 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 PNMTP11086 282 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 HIST1H1CP16403 213 aaKnown RBP12.77□□□□□ -0.36
HMGCL-203ENST00000374490 RPL4P36578 427 aaKnown RBP12.77□□□□□ -0.36
HMGCL-203ENST00000374490 GZMKP49863 264 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 HSD17B7P56937 341 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 SIRPAP78324 504 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 SERTAD2Q14140 314 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 ZNF267Q14586 743 aaPredicted RBP12.77□□□□□ -0.36
HMGCL-203ENST00000374490 PLA1AQ53H76 456 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 NPSR1Q6W5P4 371 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 CDH24Q86UP0 819 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 FRMD1Q8N878 549 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 YIPF7Q8N8F6 280 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 RCBTB1Q8NDN9 531 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 OR7G1Q8NGA0 311 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 OR4K13Q8NH42 304 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 SNX33Q8WV41 574 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 THAP4Q8WY91 577 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 FYTTD1Q96QD9 318 aaKnown RBP12.77□□□□□ -0.36
HMGCL-203ENST00000374490 PCED1AQ9H1Q7 454 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 MRPL39Q9NYK5 338 aaKnown RBP12.77□□□□□ -0.36
HMGCL-203ENST00000374490 HCN3Q9P1Z3 774 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 OR10H1Q9Y4A9 318 aa12.77□□□□□ -0.36
HMGCL-203ENST00000374490 OTOGLQ3ZCN5 2332 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF879B4DU55 563 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 APEHP13798 732 aaKnown RBP12.77□□□□□ -0.37
HMGCL-203ENST00000374490 ACVR1BP36896 505 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 GPR3P46089 330 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 CXCL12P48061 93 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 PPP1CAP62136 330 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 FAPQ12884 760 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 TNK1Q13470 666 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 TP53I3Q53FA7 332 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 PARGQ86W56 976 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 GPR135Q8IZ08 494 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF527Q8NB42 609 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 SDR9C7Q8NEX9 313 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 OR4N2Q8NGD1 307 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 ZMYND19Q96E35 227 aaPredicted RBP12.77□□□□□ -0.37
HMGCL-203ENST00000374490 PELI1Q96FA3 418 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 SPACA7Q96KW9 195 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF285Q96NJ3 590 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 MRI1Q9BV20 369 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 PPIL3Q9H2H8 161 aaKnown RBP12.77□□□□□ -0.37
HMGCL-203ENST00000374490 DPAGT1Q9H3H5 408 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 NRIP3Q9NQ35 241 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF275Q9NSD4 429 aaPredicted RBP12.77□□□□□ -0.37
HMGCL-203ENST00000374490 NUBP2Q9Y5Y2 271 aa12.77□□□□□ -0.37
HMGCL-203ENST00000374490 GPR179Q6PRD1 2367 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 CACNA1AO00555 2505 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 A0A1W2PRG6 482 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 MCIDASD6RGH6 385 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 LRRN3E7EW58 273 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 IMPA2O14732 288 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 CTDSPLO15194 276 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 GSTZ1O43708 216 aaPredicted RBP12.76□□□□□ -0.37
HMGCL-203ENST00000374490 HYAL3O43820 417 aaPredicted RBP12.76□□□□□ -0.37
HMGCL-203ENST00000374490 ADAM11O75078 769 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 TFP02787 698 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 CELA2BP08218 269 aaPredicted RBP12.76□□□□□ -0.37
HMGCL-203ENST00000374490 TDGF1P13385 188 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 TYRP1P17643 537 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 CD27P26842 260 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 ADH7P40394 386 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 MMP15P51511 669 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 SLC25A1P53007 311 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 OR10A3P58181 314 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 RPS4XP62701 263 aaKnown RBP12.76□□□□□ -0.37
HMGCL-203ENST00000374490 EFR3AQ14156 821 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 DEFB110Q30KQ9 67 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.76□□□□□ -0.37
HMGCL-203ENST00000374490 FAM27D1Q5T7N8 215 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 SLC6A19Q695T7 634 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 WBP2NLQ6ICG8 309 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms