RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 TXNL4AP83876 142 aaKnown RBP11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 HPCAP84074 193 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 EPS8Q12929 822 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 CEACAM7Q14002 265 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 GNA13Q14344 377 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 CARTPTQ16568 116 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 ZSWIM7Q19AV6 140 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 CR1LQ2VPA4 569 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 C3orf36Q3SXR2 165 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 TBRG1Q3YBR2 411 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 LRRC74BQ6ZQY2 392 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 SPATA19Q7Z5L4 167 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 RFLNBQ8N5W9 214 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 FAM169BQ8N8A8 192 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 ANKS4BQ8N8V4 417 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 ANKFN1Q8N957 763 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 OR1K1Q8NGR3 316 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 BCL2L2Q92843 193 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 SLC35A5Q9BS91 424 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 BPESC1Q9GZL8 116 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 SLC38A1Q9H2H9 487 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 CRNNQ9UBG3 495 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 LGALS13Q9UHV8 139 aa11.38□□□□□ -0.59
TRAPPC3-201ENST00000373159 ARPC4-TTLL3A0A0A6YYG9 625 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 KRT33AO76009 404 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 STAMBPO95630 424 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 CHRM4P08173 479 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 HOXB1P14653 301 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 UQCRBP14927 111 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 IL7RP16871 459 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 RPS4Y1P22090 263 aaKnown RBP11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 CXCR1P25024 350 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 GIFP27352 417 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 ETV4P43268 484 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 PPOXP50336 477 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 IDH3GP51553 393 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 P2RY4P51582 365 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 NAAAQ02083 359 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 OR7A5Q15622 319 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 SYPL1Q16563 259 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 DPY19L1Q2PZI1 675 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 TMEM225Q6GV28 225 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 RNF130Q86XS8 419 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 ZNF440Q8IYI8 595 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 OR4F15Q8NGB8 312 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 MAGEE2Q8TD90 523 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 HPS1Q92902 700 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 CCDC115Q96NT0 180 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 SOX7Q9BT81 388 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 RAB1BQ9H0U4 201 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 MOV10Q9HCE1 1003 aaKnown RBP11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 BTNL2Q9UIR0 455 aa11.37□□□□□ -0.59
TRAPPC3-201ENST00000373159 VSTM5A8MXK1 200 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 ZNF587BE7ETH6 402 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 ITM2AO43736 263 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 LGI1O95970 557 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 IGLV1-44P01699 117 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 C1QCP02747 245 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 DBIP07108 87 aaKnown RBP11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 TACSTD2P09758 323 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 MYZAPP0CAP1 466 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 ANXA11P50995 505 aaKnown RBP11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 CLNS1AP54105 237 aaKnown RBP11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 UBE2NP61088 152 aaKnown RBP11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 PDCD2Q16342 344 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 SPANXN4Q5MJ08 99 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 MRPL2Q5T653 305 aaKnown RBP11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 CREB3L2Q70SY1 520 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 GPAT4Q86UL3 456 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 LSRQ86X29 649 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 NUDCD3Q8IVD9 361 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 LRRC34Q8IZ02 419 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 NUP37Q8NFH4 326 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 WDR60Q8WVS4 1066 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 NEU4Q8WWR8 484 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 PPP1R36Q96LQ0 422 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 DOK1Q99704 481 aa11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 ROPN1BQ9BZX4 212 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 ROPN1Q9HAT0 212 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC3-201ENST00000373159 LRP5LA4QPB2 252 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 CCDC154A6NI56 674 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 A8MVM7 634 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 NR5A2O00482 541 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 TCF21O43680 179 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 TYROBPO43914 113 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 LILRA1O75019 489 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 IGKV3-15P01624 115 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 CECR9P0C854 216 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 CREB1P16220 341 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 CALCRP30988 508 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 S100A3P33764 101 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 ACAA2P42765 397 aaKnown RBP11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 SELENOPP49908 381 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 HGFACQ04756 655 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 LGALS3BPQ08380 585 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 WBP2NLQ6ICG8 309 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 LINGO2Q7L985 606 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 EPHX4Q8IUS5 362 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms