RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 GGTA1PQ4G0N0 100 aa10.75□□□□□ -0.69
VCL-202ENST00000372755 TMEM71Q6P5X7 295 aa10.75□□□□□ -0.69
VCL-202ENST00000372755 AGBL5Q8NDL9 886 aa10.75□□□□□ -0.69
VCL-202ENST00000372755 NANPQ8TBE9 248 aa10.75□□□□□ -0.69
VCL-202ENST00000372755 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.691e-6■■■□□ 16.2
VCL-202ENST00000372755 SLC6A18Q96N87 628 aa10.75□□□□□ -0.69
VCL-202ENST00000372755 FAM53CQ9NYF3 392 aa10.75□□□□□ -0.69
VCL-202ENST00000372755 RCE1Q9Y256 329 aa10.75□□□□□ -0.69
VCL-202ENST00000372755 LMO7Q8WWI1 1683 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 A0A1W2PQ09 198 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 CACNG3O60359 315 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 AIFM1O95831 613 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 PVRP15151 417 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 HBG1P69891 147 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 HBG2P69892 147 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 TLE4Q04727 773 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 HMGN3Q15651 99 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 TMEM176BQ3YBM2 270 aaPredicted RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 MRPL2Q5T653 305 aaKnown RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 FCRLAQ7L513 359 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 RBMXL3Q8N7X1 1067 aaKnown RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 OR8J2Q8NGG1 315 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 C3orf49Q96BT1 292 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 ZNF845Q96IR2 970 aaPredicted RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 FOXN4Q96NZ1 517 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 ULBP3Q9BZM4 244 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 CXXC1Q9P0U4 656 aaPredicted RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 C20orf202A1L168 122 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 ZNF593O00488 134 aaPredicted RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 IL3RAP26951 378 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 ARL16Q0P5N6 197 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 CTSL3PQ5NE16 218 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 C19orf47Q8N9M1 422 aaKnown RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 NUDT22Q9BRQ3 303 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 HRASLSQ9HDD0 168 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 NOSIPQ9Y314 301 aaKnown RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 TMEM82A0PJX8 343 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 KCNK2O95069 426 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 GABRA5P31644 462 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 WDR5BQ86VZ2 330 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 PARP16Q8N5Y8 322 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 TMEM59Q9BXS4 323 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 TCEAL2Q9H3H9 227 aaPredicted RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 PDLIM7Q9NR12 457 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 NXT1Q9UKK6 140 aaKnown RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 MBLAC1A4D2B0 266 aaPredicted RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 FAM183AA6NL82 134 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 ZNF891A8MT65 544 aaPredicted RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 GABARAPH6UMI1 98 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 AP1G1O43747 822 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 OR7C1O76099 320 aaPredicted RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 GABARAPO95166 117 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 TNFSF8P32971 234 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 RAB11AP62491 216 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 CAMK2BQ13554 666 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 HYAL4Q2M3T9 481 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 STEAP3Q658P3 488 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 C3orf58Q8NDZ4 430 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 OR4F15Q8NGB8 312 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 BSCL2Q96G97 398 aaPredicted RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 SLAMF7Q9NQ25 335 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 FAM212BQ9NTI7 297 aaPredicted RBP10.74□□□□□ -0.69
VCL-202ENST00000372755 SEMA4GQ9NTN9 838 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 GNG12Q9UBI6 72 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 OR6C65A6NJZ3 312 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 H0YGG7 62 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 BET1O15155 118 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 PSMB5P28074 263 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 UBE2KP61086 200 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 SORDQ00796 357 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 AKR1C1Q04828 323 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 HIST2H3PS2Q5TEC6 136 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 RNLSQ5VYX0 342 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 C17orf99Q6UX52 265 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 IDO2Q6ZQW0 420 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 KCNG3Q8TAE7 436 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 FGF13Q92913 245 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 RAB3CQ96E17 227 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 IL37Q9NZH6 218 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 RPH3ALQ9UNE2 315 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 ANKRD26Q9UPS8 1709 aa10.74□□□□□ -0.69
VCL-202ENST00000372755 A0A0U1RQS6 177 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 NKX6-3A6NJ46 265 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 AIPO00170 330 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 BCAT2O15382 392 aaPredicted RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 ENSAO43768 121 aaKnown RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 ONECUT3O60422 494 aaPredicted RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 DDAH2O95865 285 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 F13BP05160 661 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 CDK4P11802 303 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 PPP3CBP16298 524 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 HTR2CP28335 458 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 EIF2DP41214 584 aaKnown RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 ZNF74Q16587 644 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 OR6V1Q8N148 313 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 OR13C2Q8NGS9 318 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 ARNT2Q9HBZ2 717 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 TMEM184BQ9Y519 407 aaPredicted RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 CDC14CA4D256 554 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 SORBS2O94875 1100 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms