RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 B3GALT2O43825 422 aa15.04■□□□□ -0
SDC4-201ENST00000372733 CTSVO60911 334 aa15.04■□□□□ -0
SDC4-201ENST00000372733 ECDO95905 644 aaPredicted RBP15.04■□□□□ -0
SDC4-201ENST00000372733 CT62P0C5K7 136 aa15.04■□□□□ -0
SDC4-201ENST00000372733 CTNNB1P35222 781 aa15.04■□□□□ -0
SDC4-201ENST00000372733 EXOSC6Q5RKV6 272 aaKnown RBP15.04■□□□□ -0
SDC4-201ENST00000372733 TMEM81Q6P7N7 255 aa15.04■□□□□ -0
SDC4-201ENST00000372733 UNQ9370/PRO34162Q6UXP9 181 aa15.04■□□□□ -0
SDC4-201ENST00000372733 CDRT4Q8N9R6 151 aa15.04■□□□□ -0
SDC4-201ENST00000372733 POMGNT2Q8NAT1 580 aa15.04■□□□□ -0
SDC4-201ENST00000372733 ZBTB44Q8NCP5 570 aa15.04■□□□□ -0
SDC4-201ENST00000372733 OR52B4Q8NGK2 314 aa15.04■□□□□ -0
SDC4-201ENST00000372733 OR6K6Q8NGW6 343 aa15.04■□□□□ -0
SDC4-201ENST00000372733 SERINC2Q96SA4 455 aa15.04■□□□□ -0
SDC4-201ENST00000372733 AKAP7Q9P0M2 348 aaPredicted RBP15.04■□□□□ -0
SDC4-201ENST00000372733 TRBV23OR9-2A0A075B6M9 112 aa15.04■□□□□ -0
SDC4-201ENST00000372733 A0A1B0GVT2 93 aa15.04■□□□□ -0
SDC4-201ENST00000372733 PRR32B1ATL7 298 aa15.04■□□□□ -0
SDC4-201ENST00000372733 TEX46H3BTG2 121 aa15.04■□□□□ -0
SDC4-201ENST00000372733 BRINP1O60477 761 aa15.04■□□□□ -0
SDC4-201ENST00000372733 GIPP09681 153 aaPredicted RBP15.04■□□□□ -0
SDC4-201ENST00000372733 AK4P27144 223 aaPredicted RBP15.04■□□□□ -0
SDC4-201ENST00000372733 TLX1P31314 330 aaPredicted RBP15.04■□□□□ -0
SDC4-201ENST00000372733 P2RX1P51575 399 aa15.04■□□□□ -0
SDC4-201ENST00000372733 AP3S2P59780 193 aa15.04■□□□□ -0
SDC4-201ENST00000372733 NANOS3P60323 173 aaKnown RBP15.04■□□□□ -0
SDC4-201ENST00000372733 PSMA6P60900 246 aaKnown RBP15.04■□□□□ -0
SDC4-201ENST00000372733 DHODHQ02127 395 aa15.04■□□□□ -0
SDC4-201ENST00000372733 ALG10BQ5I7T1 473 aa15.04■□□□□ -0
SDC4-201ENST00000372733 FAM78AQ5JUQ0 283 aa15.04■□□□□ -0
SDC4-201ENST00000372733 TMEM69Q5SWH9 247 aa15.04■□□□□ -0
SDC4-201ENST00000372733 FBXO42Q6P3S6 717 aa15.04■□□□□ -0
SDC4-201ENST00000372733 GRAMD2AQ8IUY3 354 aa15.04■□□□□ -0
SDC4-201ENST00000372733 C12orf76Q8N812 135 aaPredicted RBP15.04■□□□□ -0
SDC4-201ENST00000372733 SYNPRQ8TBG9 265 aa15.04■□□□□ -0
SDC4-201ENST00000372733 NT5CQ8TCD5 201 aa15.04■□□□□ -0
SDC4-201ENST00000372733 FCAMRQ8WWV6 532 aa15.04■□□□□ -0
SDC4-201ENST00000372733 HSPA12BQ96MM6 686 aa15.04■□□□□ -0
SDC4-201ENST00000372733 ARPC5LQ9BPX5 153 aa15.04■□□□□ -0
SDC4-201ENST00000372733 TSPAN10Q9H1Z9 355 aaPredicted RBP15.04■□□□□ -0
SDC4-201ENST00000372733 PPA2Q9H2U2 334 aa15.04■□□□□ -0
SDC4-201ENST00000372733 TRPV4Q9HBA0 871 aa15.04■□□□□ -0
SDC4-201ENST00000372733 C14orf105Q9NVL8 296 aa15.04■□□□□ -0
SDC4-201ENST00000372733 SERTAD3Q9UJW9 196 aa15.04■□□□□ -0
SDC4-201ENST00000372733 FOXJ3Q9UPW0 622 aa15.04■□□□□ -0
SDC4-201ENST00000372733 SLC17A4Q9Y2C5 497 aa15.04■□□□□ -0
SDC4-201ENST00000372733 SLC22A7Q9Y694 548 aa15.04■□□□□ -0
SDC4-201ENST00000372733 ANKRD20A5PA0PJZ0 165 aa15.03■□□□□ -0
SDC4-201ENST00000372733 NAP1L6A6NFF2 107 aa15.03■□□□□ -0
SDC4-201ENST00000372733 SERPINI2O75830 405 aa15.03■□□□□ -0
SDC4-201ENST00000372733 PROS1P07225 676 aa15.03■□□□□ -0
SDC4-201ENST00000372733 ZP3P21754 424 aa15.03■□□□□ -0
SDC4-201ENST00000372733 IGFALSP35858 605 aa15.03■□□□□ -0
SDC4-201ENST00000372733 KCTD20Q7Z5Y7 419 aa15.03■□□□□ -0
SDC4-201ENST00000372733 OR6V1Q8N148 313 aa15.03■□□□□ -0
SDC4-201ENST00000372733 C1orf216Q8TAB5 229 aa15.03■□□□□ -0
SDC4-201ENST00000372733 ZNF296Q8WUU4 475 aaPredicted RBP15.03■□□□□ -0
SDC4-201ENST00000372733 THEM6Q8WUY1 208 aa15.03■□□□□ -0
SDC4-201ENST00000372733 KLHL15Q96M94 604 aa15.03■□□□□ -0
SDC4-201ENST00000372733 NMNAT3Q96T66 252 aa15.03■□□□□ -0
SDC4-201ENST00000372733 FGF22Q9HCT0 170 aa15.03■□□□□ -0
SDC4-201ENST00000372733 OR5V1Q9UGF6 321 aa15.03■□□□□ -0
SDC4-201ENST00000372733 CA5BQ9Y2D0 317 aa15.03■□□□□ -0
SDC4-201ENST00000372733 MFSD2BA6NFX1 497 aa15.03■□□□□ -0
SDC4-201ENST00000372733 CREBL2O60519 120 aaPredicted RBP15.03■□□□□ -0
SDC4-201ENST00000372733 HNRNPA1P09651 372 aaKnown RBP eCLIP15.03■□□□□ -0
SDC4-201ENST00000372733 CDK2P24941 298 aa15.03■□□□□ -0
SDC4-201ENST00000372733 GGTLC2Q14390 218 aa15.03■□□□□ -0
SDC4-201ENST00000372733 OLFML2AQ68BL7 652 aa15.03■□□□□ -0
SDC4-201ENST00000372733 PWWP2BQ6NUJ5 590 aa15.03■□□□□ -0
SDC4-201ENST00000372733 ALKAL2Q6UX46 152 aa15.03■□□□□ -0
SDC4-201ENST00000372733 VITQ6UXI7 678 aa15.03■□□□□ -0
SDC4-201ENST00000372733 SPICQ8N5J4 248 aa15.03■□□□□ -0
SDC4-201ENST00000372733 OR5T3Q8NGG3 340 aa15.03■□□□□ -0
SDC4-201ENST00000372733 OR14A16Q8NHC5 309 aa15.03■□□□□ -0
SDC4-201ENST00000372733 ZNF426Q9BUY5 554 aa15.03■□□□□ -0
SDC4-201ENST00000372733 SEMA4CQ9C0C4 833 aa15.03■□□□□ -0
SDC4-201ENST00000372733 KIR3DX1Q9H7L2 352 aa15.03■□□□□ -0
SDC4-201ENST00000372733 TAS2R10Q9NYW0 307 aa15.03■□□□□ -0
SDC4-201ENST00000372733 THAP10Q9P2Z0 257 aaPredicted RBP15.03■□□□□ -0
SDC4-201ENST00000372733 TBC1D29Q9UFV1 150 aa15.03■□□□□ -0
SDC4-201ENST00000372733 OR2M5A3KFT3 312 aa15.02■□□□□ -0
SDC4-201ENST00000372733 ANKRD61A6NGH8 418 aa15.02■□□□□ -0
SDC4-201ENST00000372733 TUBAL3A6NHL2 446 aa15.02■□□□□ -0
SDC4-201ENST00000372733 FAM171A2A8MVW0 826 aa15.02■□□□□ -0
SDC4-201ENST00000372733 IFNGR1P15260 489 aa15.02■□□□□ -0
SDC4-201ENST00000372733 NAT1P18440 290 aa15.02■□□□□ -0
SDC4-201ENST00000372733 KIAA1024LP59773 190 aa15.02■□□□□ -0
SDC4-201ENST00000372733 HTRA3P83110 453 aa15.02■□□□□ -0
SDC4-201ENST00000372733 BTN1A1Q13410 526 aa15.02■□□□□ -0
SDC4-201ENST00000372733 GAS6Q14393 721 aa15.02■□□□□ -0
SDC4-201ENST00000372733 PSRC1Q6PGN9 363 aaPredicted RBP15.02■□□□□ -0
SDC4-201ENST00000372733 COQ8AQ8NI60 647 aa15.02■□□□□ -0
SDC4-201ENST00000372733 CMTM3Q96MX0 182 aa15.02■□□□□ -0
SDC4-201ENST00000372733 OR1F2PQ96R84 312 aa15.02■□□□□ -0
SDC4-201ENST00000372733 MS4A7Q9GZW8 240 aaPredicted RBP15.02■□□□□ -0
SDC4-201ENST00000372733 TAS2R5Q9NYW4 299 aa15.02■□□□□ -0
SDC4-201ENST00000372733 ING1Q9UK53 422 aaPredicted RBP15.02■□□□□ -0
SDC4-201ENST00000372733 MCRIP1C9JLW8 97 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 ZFPL1O95159 310 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms